Alosa sapidissima (American shad): 121698065
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Entry
121698065 CDS
T11137
Symbol
obsl1a
Name
(RefSeq) obscurin-like protein 1a isoform X1
KO
K19574
obscurin-like protein 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asad03036
]
121698065 (obsl1a)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
121698065 (obsl1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_MYOM1
VEGFR1-3_N_Ig-like
Ig_4
Izumo-Ig
V-set_CD47
VEGFR-1-like_Ig-like
Tissue_fac
fn3
Motif
Other DBs
NCBI-GeneID:
121698065
NCBI-ProteinID:
XP_041935727
LinkDB
All DBs
Position
23:complement(16113641..16139848)
Genome browser
AA seq
2305 aa
AA seq
DB search
MDPFGGAPRVLGYSRPVVVSSGADALLKCQIGGDPQPDVVWERKNIPLFSEGRYSISQEG
KAYFLRISCVSPEDAGQYICKAKNSIGETCAAATLKVEHDSQEVLVVPPPPPAQHPQPHQ
PQPLQNGSIEPEKHLRQEVKMEEQQQKELDFENRDRPRFLIKPLSLRVDRGEDAAFSCKL
TGEPLPEVVWEKDGKRLKEIFESSHYRVCQQDGGWYQLKVFRTRAPDGGVYTCRASNESG
ESVAGAVLLVQPVPETREDRMQNGYANGHWTPAPGSSPSSPSSSSSSPHGKDRHHHMAKH
SKEPPLNVAKAKKFAVSEGKHAKFRCYVTGKPKPEIVWKKDGVPLEPGRRHMMFEDREGY
YTLKVLYCKQQDSGLYICAASNALGNTLSAVLLSVKAPAVRFKRGLKDVEVRERDVAVLE
CEVPEESIPTAWYLEDQRLQPSNKYDIEQRGTRRTLTIQNVGADDDGVYLCEMADGGKSI
AELSVKGTIVRKLPRKLEVLEGENAAFCVEVEEEDMEVYWYKDGNQLRETHQTILKSFGK
THILVFVNCSYQDSGTITFVAGRSRNSSRLKVKAARHCAPPCPVGVSMDTHTANGAMLSW
EPAPNLQTGTKTVYVLERQEVGSQEWRKCLSTETATTVEVLGDSVPCEGDYRFRVCCVNK
YGRSGHVEFPKVIRLVPGPKIKTPLKNVVVTDGDDAVFFIELSATMIGTWFLNSTQLADS
ENITLRQTQHQHSLQIRGVRDIYNGAEITFIASGVRDSALLQVEPREVKFAPLSEQDTAK
KVEIGDPIVLYCEVSHPSAKVQWFKDGVELEREDGLNIQSEGNMRRIVIQSSEYSHSGHY
TCKALGDTIMFNVEVDAGRPMFAPVPEEEKNKSVDAGDSVVLQCDVSDPDAEVHWFKDGQ
PVVLQDGVEVQTQGKRRMLVIPSASYQHAGMYTCQTSDDVSVFQVDITGPPVTFKEIPEE
DCVKSAMELDPVVLYCEVSRPDAVARWTKDGVEVQASDNVTVQTEGIMRRLIIRSADLMD
AGTYTCHAGDSSMSFTVNIKEPPVMIVDPKDDIHLDQYISEEIVLNCELSRSSGVARWFK
DGLEVLETENVRVSSEGPYRRLTILCGTREDSGEYVCDTGGDSVFFQLSVKEAPVRFVSP
CESEVAMVRPAGHPVELCCELTRSEADVLWFRDGLEVDEADGLVREVDGPHRKLVIPIAL
VEDTGEYICESADDTVTFLLTIEEPPVQLARPAQMESVVEPVSGEPLVLECEVSRDNAEV
NWLKDGVELELDNDNITVTTDGLIRRLTIHSPSREDSGKYTCDAKDDAIDFNVNVKDAPV
TILRKSEIETDYNCVVSDDIELECELSRASGKACWYKDGQRLEENERFCVEKEGAFRSLI
ILNADLEDSGEYFLDVLDDSITFTVNVQEPPVTIVGNSDDPEYQEMVSGDDLILAIEVSR
ANAPVQWYCNEKLLVEDSRTQIETYGTLRKLIITDIRPSDSGKYTCDAVNDKMMTVVKVQ
EPPVTIVNKKEVNKVTGYESESITLEVELSREKPTVRWMKDWTPVNNERFRIGYKGTTHY
LTIDPLRRSDSGEYTCDVGDDEMQFSLLVKEMRVKFVRHLHDTVAYKDGMITLRCEVGKP
KADVLWLKDSVEILPSRRFTIRADDQERSLTIHRLTKEDAGEYSCESRDDCTSAYLRVEL
PRMVEFLTELHNTTVLEGEDATFKCVVSPEDAQVVWLMDNEPIPLGDRFEALQNGLCHTL
LIRRCQMLDMSRITAECEGVTSKASLKIQEAQILFTKRMEPVDGEEFQEATLETEISLET
GEVQWMRQGVVIQSGPHYTLSQTGRKRHLTIHNLGLSDRGTYRCETLHDRTQVKLNVEPR
KVFVRKSLMDIETFERETASFEVELSHADVEGVWQKDGLRIKPNNNWMVSANGRVHGLTM
SNLTLEDTGTIVFSSDGLRTSARLQVKETPVTILRKLTDLSFEEGSLVTLECELSRPNVE
VKWFKDETELKAGKNHRIYSMGRKRFLQILESSPSDSGSYSCEVGDLSTSCDLNIYEHAL
EIVQHLEDLCIQEDQNAVFMCEVSLMDVSGDWYKDDHKLKPTSSIKIRREGTKHFLLMCN
VTAEDSGEIKFVAKDLESIGYLEVEDRPVSIVKPLRDRTALQKHRVILECTVSTPRCDVT
WYRGDTELESSDRMEITSEGCCHRLIIQQVALEDEGIYSVEVGEHTSTAKLMVEGQSILL
VRELEDVEVTAPDQACFECELSMPLLKAPVWSLNGETLQNSPEVRLETQGSVHKLIFKKT
SVDMCGTVRFTIGKAKTCAQLIVDN
NT seq
6918 nt
NT seq
+upstream
nt +downstream
nt
atggatccgtttggcggcgcgccgcgcgtgctcggctactcgcggcccgtggtggtcagc
agcggcgcagacgccttgctcaagtgtcagatcggtggagacccccagcccgacgtggtg
tgggagcgcaagaacatacccctcttctccgagggccgctacagcatctcgcaggagggc
aaggcctacttcctgcgcatttcctgtgtgagtcccgaagacgccgggcagtacatatgc
aaggccaagaacagcatcggagagacgtgcgcggccgctactctaaaggtggagcatgat
tcgcaggaggtgctcgtagtgcccccaccaccacccgcccaacacccgcaaccacaccaa
ccacagccactacagaacgggagcatagagccggagaagcatctacgacaggaggtgaag
atggaggagcagcaacagaaggagttggattttgagaaccgcgacaggcctcgcttcctc
atcaagccactgtcgctgcgcgtggaccggggcgaggacgccgccttctcctgcaagctg
accggcgagccgctgcccgaggtggtgtgggagaaggacggcaagcggctgaaggagatc
ttcgagagctcgcactaccgcgtgtgccagcaggacggcggctggtaccagctgaaggtg
ttccgcacgcgggcgcccgacggcggcgtctacacgtgccgcgcgtccaacgagagtggc
gagtcggtggccggcgctgtcctcctggttcagcccgtgcctgagacccgcgaggatcga
atgcagaatggctacgccaatggccattggactcctgctcctgggtcctccccttcgtcg
ccatcatcatcatcatcatcaccccacggcaaagaccgtcaccaccacatggccaagcac
agcaaggagccacccctgaacgtggccaaggccaagaagtttgctgtgtcagaagggaag
catgccaagttccgttgctatgtgacggggaagccaaagccggagatcgtgtggaagaaa
gatggtgtgccccttgaacccggtcgacgtcacatgatgtttgaggaccgggagggctac
tacactctgaaggtgctgtattgcaaacagcaggattctggcctctacatatgtgccgcc
tccaatgctcttggcaacaccctaagtgctgtactcctgtctgtgaaagcgccggcggtc
cggttcaagcggggtctgaaggacgtggaggtgcgggagcgtgacgtggccgtgctggag
tgcgaggttccggaggagtccatccccaccgcctggtacctggaggaccagcggctccag
cccagcaacaagtacgacatcgagcagaggggcaccaggaggacgctgaccatccagaac
gtcggggcggacgatgacggagtctacctctgcgaaatggccgatggggggaagagcatc
gctgaactctcggttaaaggcaccattgtacgcaagctgcccaggaagctggaggttctg
gagggggagaatgctgccttctgtgtcgaggtggaggaggaggacatggaggtctactgg
tacaaagatggcaaccagttacgagagactcaccagacaatcctcaagtcctttggcaag
acgcacatcctggtgttcgtgaactgctcgtaccaggattcagggacaatcacatttgtt
gcagggaggtccaggaatagttcacggctaaaggtcaaagctgcgaggcactgcgccccg
ccatgcccggttggggtcagtatggacacgcacacagccaacggcgccatgctctcctgg
gagcccgcgcccaacctgcagacgggcaccaagaccgtgtacgtgctggagcggcaggag
gtgggctcgcaggagtggcgcaagtgcctgagcacggagacggccacgaccgtggaggtg
ctgggcgacagcgtgccctgcgagggcgactaccgcttccgagtctgctgcgtcaacaag
tacggccgcagcggccacgtggagttccccaaggtcatccggctagtgcctggaccaaag
ataaagacgcccctgaaaaatgtggtggtcactgatggtgacgatgccgtattcttcatc
gagctgtccgccaccatgatcggcacctggttcctgaacagcacccagctggctgacagc
gagaacatcacgcttcgccagacccagcaccagcactccctgcagatccgcggcgtccgc
gacatctacaacggggctgagatcaccttcatcgccagtggcgtccgagattccgctctt
ctgcaagttgaaccacgtgaggtcaagtttgcccctctaagtgagcaggacaccgccaag
aaagtagagattggagatcccatcgtcctctactgcgaggtgtcacacccgtcagcgaag
gtccagtggttcaaggatggggtggagcttgagagggaggatgggctgaatatccaatca
gagggcaatatgaggaggattgtcatccagtcttccgaatactcccactcgggacactac
acctgcaaggcgttgggcgacaccattatgtttaacgtggaagtcgatgctggccgaccg
atgtttgctcccgtaccagaggaggagaagaacaagtccgttgacgctggcgactccgtc
gtcctccagtgtgacgtctcagaccctgatgctgaggtccactggtttaaagatggacag
ccagtcgtcctgcaggatggtgtggaggtccagacacagggcaaacggaggatgttggtc
attccgtctgccagttaccagcacgctggcatgtacacgtgtcaaacaagtgacgatgtc
agtgtgtttcaggtcgacattacaggtccgccggtcacctttaaagagataccagaggag
gactgcgtaaagtcggccatggagctggaccctgtggtcctgtactgcgaggtctcacgt
ccagacgctgtcgctcgctggacgaaggacggcgtggaggtgcaggcgagcgataacgtc
acagtccagactgaggggatcatgaggaggttgattatcaggtcagccgacctgatggat
gctgggacatacacctgccacgctggagacagcagcatgtcattcactgtcaacattaaa
gaacctccggtcatgattgtggaccctaaggatgacatccaccttgaccagtacatctct
gaagagattgtgctgaactgcgagctgtctcgctccagcggggtggcccggtggttcaag
gacggccttgaggtcctggagacggagaacgtacgggtcagctctgaggggccctacagg
aggctgaccatcctctgcggcaccagggaggactctggggagtatgtgtgcgacactggt
ggagactcggtgttcttccagcttagtgtcaaagaggcgcctgtgcgcttcgtctctcct
tgtgagtcggaggtggcgatggtgcggccggcggggcatccggtggagctgtgctgcgag
ctgacccgttccgaggccgacgtgctatggttccgtgacggcctggaggtggacgaggcg
gacggcctggtccgggaagtggacgggccccacaggaagctggtcatacccattgccttg
gtagaggacacgggagagtatatctgcgagtcggctgatgacaccgtgaccttcctgctg
accattgaagagcctcctgtccagttggcgcggcccgcccagatggagagtgttgtggag
ccggtgtctggggagcccctggtgctggagtgtgaggtatcccgtgacaacgctgaggtg
aactggcttaaggatggggtggaactggagctggacaacgacaacatcaccgtgacgacc
gacggcctcatccgtcgactgaccatccactcgccctcgagagaagactcggggaaatac
acctgtgatgccaaggatgatgctattgacttcaacgtcaacgtcaaagacgccccagtg
acgatcctgcggaaatcagagattgaaacggactacaactgtgtagtgtccgatgacatt
gagctggagtgtgagctgtccagggccagtgggaaggcctgctggtacaaagacggacag
aggctggaggagaacgagaggttctgtgtggagaaagagggggccttccgctcgctcatc
atcctcaatgcagatctggaagattccggagagtatttcctcgatgtcctggacgacagc
atcacgttcacagtgaatgtgcaagagcccccggtgaccatcgtgggaaactcggacgat
ccggagtatcaggaaatggtgtcaggagatgacctcatccttgccattgaggtctcccgg
gccaacgcccccgtacagtggtactgtaatgagaagcttctggtcgaggactcgcggacc
caaattgagacgtacggcacgctgaggaagctcatcattaccgacatcaggccctcggac
tcggggaaatacacgtgtgatgcggtcaatgataagatgatgaccgttgtcaaagtgcaa
gaacctcctgtcaccatcgtgaacaagaaggaggtgaacaaagtgaccggctatgagagc
gagagcatcactctggaggtggagctctcacgagagaagcccaccgtccggtggatgaag
gactggacgccggtcaacaacgagcgcttccgtatcggctacaagggcacgacacactat
ctgactatagacccactgcgaaggtccgacagtggggagtacacgtgtgacgttggcgac
gatgagatgcagtttagcctgctggtgaaagagatgcgagtgaagtttgtgaggcacctg
cacgacaccgtggcctacaaggacggcatgatcacgctgcgctgcgaggtgggcaagccc
aaggccgacgtgctgtggctgaaggacagcgtggagatcctccccagccgacgctttacc
atccgggccgacgaccaggagcggagcctcaccatccaccgcctcaccaaggaggacgcc
ggggagtacagctgcgagtcccgcgacgactgcaccagcgcctacctcagagtcgagctg
ccccgtatggtggagtttctgactgagctccacaacaccacggttctggaaggcgaggac
gccaccttcaagtgcgtggtgtcgcccgaagacgcccaggtggtgtggctgatggacaac
gagcccatcccgttgggtgatcgcttcgaggccttgcagaacggcctgtgccacacactc
ctcatccgccgctgccagatgctggacatgtccaggataactgccgagtgtgagggggtc
acctctaaagccagcctcaaaatacaagaggcccagattctgttcactaagcgcatggag
ccggtggatggagaggagttccaggaggccactctggagacggagatcagcctggagacc
ggggaggtgcagtggatgcgtcagggggtggtcatccagtcagggccccactacacgctg
tcccagaccggacgcaagcgccacctcaccatccacaacctgggcctgtccgaccgcggc
acttaccgctgcgagaccctgcatgaccgcacgcaggtcaaactcaacgtggagccgagg
aaagtctttgtccgtaagagtctgatggacatcgagacgtttgagagggagacggcgtct
ttcgaggtggagctgtcccatgcagacgtggagggggtgtggcagaaggacggccttcgc
atcaagcccaacaacaactggatggttagcgccaatgggcgcgtccacggcctcaccatg
tccaacctcactctggaggacacgggaaccatcgtcttctcatcggatggcttgaggacc
tcggctcgactgcaggtgaaagaaaccccagtgactatcctgaggaaactcacagatctc
agctttgaagagggctcacttgtgactttggagtgtgagctgtccagaccaaatgttgaa
gtaaaatggttcaaggacgagacggagctgaaggctggtaagaaccacagaatctactcc
atggggaggaagcgcttcctgcagatcctggagtccagccccagcgactcgggcagctac
tcgtgtgaagtcggagatctcagcacctcgtgtgaccttaacatatatgagcatgcattg
gagatcgtccagcatctggaggacttgtgcatccaggaggatcagaatgctgtgttcatg
tgcgaggtgtccttgatggatgtgtctggagactggtacaaggacgaccacaagctaaag
cccaccagctccatcaaaatccgacgggaaggaacaaagcacttcctcctcatgtgcaac
gtgacagctgaggactctggggagatcaaatttgttgcaaaggatctggaatccatcggc
tatcttgaagtggaggaccgtcctgtaagcatagtgaaacccctgcgtgaccggacagcc
ctgcagaagcaccgcgtcatcctggagtgtacagtgtccacaccacgctgtgacgtcaca
tggtaccgcggcgacacagagctggaatcctccgaccgcatggagatcaccagcgaggga
tgctgccacaggctgatcatccagcaggtggcgctagaggatgagggaatatacagtgta
gaggttggggagcacacttcaactgcaaagctcatggtggaaggtcagtctatcctgctg
gtcagggaactggaagacgttgaggtgaccgctccggatcaggcctgctttgagtgcgag
ctctctatgcccctgctgaaggccccagtgtggtcactgaatggggagacgctccagaac
agcccggaggtccgactcgagacccagggctcggtccacaagctcatctttaagaagacc
tcagtggacatgtgcgggacagtgcgcttcaccatcggaaaagccaagacctgcgcacag
ctcatagtagataactag
DBGET
integrated database retrieval system
