KEGG   Alosa sapidissima (American shad): 121698083
Entry
121698083         CDS       T11137                                 
Name
(RefSeq) tubulin beta-4 chain
  KO
K07375  tubulin beta
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04145  Phagocytosis
asad04517  IgSF CAM signaling
asad04540  Gap junction
asad04814  Motor proteins
asad05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:asad00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    121698083
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    121698083
  09144 Cellular community - eukaryotes
   04540 Gap junction
    121698083
  09142 Cell motility
   04814 Motor proteins
    121698083
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    121698083
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:asad03036]
    121698083
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:asad04812]
    121698083
   04147 Exosome [BR:asad04147]
    121698083
Chromosome and associated proteins [BR:asad03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     121698083
Cytoskeleton proteins [BR:asad04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    121698083
Exosome [BR:asad04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   121698083
  Exosomal proteins of colorectal cancer cells
   121698083
  Exosomal proteins of bladder cancer cells
   121698083
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 121698083
NCBI-ProteinID: XP_041935770
LinkDB
Position
23:16217055..16220647
AA seq 444 aa
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYFNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEGEEDIE
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgagggagattgttcatttgcaagccggccagtgtggaaatcaaataggcgcgaagttt
tgggaggtgataagtgatgaacatggcattgaccctactggcacctatcacggagacagt
gatctacaactggaaagaataaatgtctacttcaatgaggcaactggtgggaaatatgtc
cctcgtgccatccttgtggatttggagcctggaaccatggattctgtccgttcagggcca
tttggtcaaatcttccggcctgacaactttgtctttggtcagagtggcgctggaaacaac
tgggcaaaaggtcattacacagagggagcggaactagtggattctgtgctagatgttgtc
aggaaggaagcagagagctgcgactgtctacagggattccagcttacgcattctttaggt
ggtggcacaggatcaggcatgggaactttgttgattagtaagattcgtgaagagtaccca
gaccgcatcatgaatacctttagcgtagtcccctcccctaaagtgtcagatacagtggta
gagccttataatgcaaccttgtctgtccatcagttagttgagaatacagatgaaacatac
tgcattgacaatgaagccctgtatgatatctgtttccgcaccctgaagctaaccactccc
acatacggcgacctcaaccatttggtttctgctaccatgagtggtgtcaccacctgcctt
cgtttcccaggacagctgaatgcagatcttcgcaagctggcagtaaacatggtacccttt
ccccgtctgcacttctttatgcctggttttgctcccctcaccagccgtggcagccagcag
taccgtgccctcaccgtgcctgaactcacccagcagatgttcgacgccaagaacatgatg
gctgcttgcgaccctcgtcacggacgctacctgacggtagcagccatcttccgtggccgc
atgtccatgaaggaggtggatgagcagatgttgaatgtccagaacaagaacagcagctac
tttgtcgagtggatccccaataacgtgaagacggctgtttgtgacattccacctcggggt
ctcaagatgtccgccacattcattggtaacagcacagccattcaagagctgttcaaacgc
atctcggagcagttcacagccatgttccgccgcaaggccttcttgcactggtacaccgga
gagggcatggatgagatggagttcacagaggccgagagcaacatgaacgacctggtttct
gagtaccagcagtaccaggacgccactgccgaggaggagggcgagtttgaggagggtgaa
gaggacatcgagtga

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