Alosa sapidissima (American shad): 121698104
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Entry
121698104 CDS
T11137
Symbol
rfx3
Name
(RefSeq) transcription factor RFX3 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121698104 (rfx3)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Other basic domains
RF-X
121698104 (rfx3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX_DNA_binding
RFX1_trans_act
Motif
Other DBs
NCBI-GeneID:
121698104
NCBI-ProteinID:
XP_041935798
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Position
23:21427537..21463265
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AA seq
778 aa
AA seq
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MQTPEAGADSSTVPLQTSVQPAVSAQQGVSQVPVQQQAQTVQQVQHVYPAQVQYVEENNG
VYSNGTIRTYSYSEPQLYSQNSGGNYFDTQGGSSQVTTVLSSHGMANNNNGGTGGMGMGL
AGGQIISSSGAYLIGGGNSMDSATPHPTTQTPRASPATVSIEMAIETLQKSEGLSSQRSS
LLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFMGLRT
RRLGTRGNSKYHYYGIRVKPDSPLNRLQEDMQYMALRQQPMQQKQRFKPVQKVDSMSGEN
YSGGGVQHTASAAEQTVIAQSQHHQQFLDASRALPEFAELDLGESNVDHISPDDVKSLQT
LYREHCEAILDVVVNLQFSLIEKLWQTFWRYSHSSTVEGATITENSGVSEIESRLPRTTL
LLLCRNETVLKWMSACDHLMYQVLVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSTAMN
AVPQRMVQAKVSAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQ
EQASWVCQCEEGVVQRLEQDFKATLQQQSSLEQWAAWLDNVVSQVLKPYEDRASFPKAAR
QFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIGVMG
ECDQLNAMSPNMIDKDEVSEMDSDLDDDLDESGEPLAKREKAESEVEPEVIQVLQVGTME
DGSSAVVGMLSSLPAPGSAATATIIPAEHILPPPLPLPPGATSTIRHCNSAGNSFAPV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgcccgaggccggcgctgactcgtccacggtgcccctccagaccagcgtgcag
ccggccgtttccgcacagcaaggggtctctcaggtgcccgtccagcagcaggctcagact
gttcagcaggtgcagcatgtgtatcctgcacaagttcagtatgttgaggagaacaacggt
gtctactccaatggaaccattcggacttactcatactcggagcctcagctctacagccag
aacagcggggggaactacttcgacacgcaggggggttcgtcgcaggtgactacggtgttg
tcgtcgcacggcatggccaacaacaacaacggcggcacaggcggcatgggcatgggtctg
gcgggggggcagatcatcagcagctcgggcgcctacctcatcggcggaggcaactccatg
gacagcgctaccccgcaccccaccacgcagacgcccagggcctcgccggccacggtcagt
attgaaatggcgattgagacgctccaaaagtctgaagggttgtcctctcagagaagctcg
ctgctcaacagccatctgcagtggctcctggacaactacgagacggcggagggcgtgagc
ctgccgcgctccaccctctacaaccactacctgcgccactgccaggagcagaagctggac
ccggtcaacgccgcctcttttggcaagctcatccgctccatcttcatggggctccgcact
agacgcctgggcaccagggggaactctaagtaccactactacgggatccgcgtcaaacct
gactcgcccctcaaccggctgcaggaggacatgcagtacatggctctccgacagcagccc
atgcagcagaaacagaggttcaagccggtgcagaaggtggacagcatgtcgggggagaac
tactctggtggtggggtgcagcacacagccagcgccgccgagcagacggtcatcgctcaa
agccagcaccaccagcagttcctggatgcctcccgtgcgctgcccgagtttgcagagctt
gacctgggcgagagcaacgtggaccacatctcccctgatgacgtcaagtccctgcagacg
ctctacagggagcactgtgaggccatcttggacgtggttgtgaacctacagttcagcctg
attgagaagctgtggcagaccttttggcggtactcccactccagtactgtagagggagcc
acaattacagagaacagtggggtgagtgagatcgagagccgtctgccgcggaccacgctg
ctactgctctgcaggaatgagacggtgctgaagtggatgagtgcctgcgaccacctcatg
taccaggtcctggtggagatactcataccagatgtcctcaggcctatacccagtgccttg
actcaagccatccgcaactttgccaaaagcctggagggctggctcagcacggccatgaac
gctgtgccccagaggatggtccaggccaaggtgtcggctgtgagtgcctttgcgcagacc
ctgcgcaggtacacatccctgaaccacctggcgcaggcggcgcgcgccgtgctgcagaat
acctcgcagatcaaccagatgctgtccgacctcaaccgagtggacttcgccaacgtgcag
gagcaggcctcgtgggtgtgccagtgtgaggagggcgtggtgcagcgcctggagcaggac
ttcaaagccacactgcagcagcagagctccctggagcagtgggccgcctggctggacaac
gtggtcagccaggtgctcaagccctacgaggaccgcgccagcttccccaaggccgcgcgc
cagttcctgctcaagtggtccttctacagctcgatggtgatccgggacctgaccctgcgc
agtgcggccagcttcggctccttccacctgatccgcctgttgtacgacgagtacatgttc
tacctggtggagcaccgcgtggcccaggccactggggagaccccgataggcgtcatggga
gagtgtgaccagctgaacgccatgtctcccaacatgatcgacaaagatgaggtgagcgag
atggacagcgacctggacgatgacctggacgagagcggcgagccgctggctaagcgggag
aaggccgagtcggaggtggagcccgaggtcatccaggtgctgcaggtgggcaccatggag
gacggcagcagcgctgtggtgggcatgctcagctcgctgcccgccccgggcagtgccgcc
acggccaccatcatcccggccgagcacatcctgcccccgccgctgccactgccgcccggc
gccaccagcaccatccgccactgcaacagcgccgggaacagcttcgcccctgtgtga
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