Alosa sapidissima (American shad): 121698119
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Entry
121698119 CDS
T11137
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04080
Neuroactive ligand-receptor interaction
asad04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121698119
04082 Neuroactive ligand signaling
121698119
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asad04040
]
121698119
Ion channels [BR:
asad04040
]
Ligand-gated channels
GABA-A
121698119
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
121698119
NCBI-ProteinID:
XP_041935840
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Position
23:complement(7676808..7717891)
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AA seq
523 aa
AA seq
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MEPDEPRKKRLNMIIWWILLQGFWSVYGELPFIADNNAAMLVNWNAVDGNKKLYAIYDTS
ANEPGNMSFVKETVDRLLKGYDIRLRPDFGGAPVAVGMSIDVASIDMVSEVNMDYTLTMY
FQQYWRDKRLAYMGIPLNLTLDNRVADQLWVPDTYFLNDKKSFVHGVTVKNRMIRLHPDG
TVLYGLRITTTAACMMDLRRYPLDEQNCTLEIESYGYTTDDIEFYWKGGDNAVTGVQRIE
LPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLKRNIGYFILQTYMPSILITILSWVSFWI
NYDASAARVALGITTVLTMTTINTHLRETLPKIPYVKAIDMYLMGCFVFVFLALLEYAFV
NYIFFGRGPQMQKRMAEKAEKANNERAKIEANRSGAEGGKTGKHSNQVQGKRMTRAVESH
GNILLTTLEIHNEVAGNEVTTSLADKRNSVTFETSGIQYRKQSVAGREHRAPAKRGRLRR
RSSQLKIKIPDLTDVNTIDRWSRMIFPGAFSLFNLIYWLYYVN
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagccggatgagcctcggaaaaaaagactgaacatgatcatttggtggattttactg
caaggattttggagtgtctatggggaacttcctttcattgccgacaacaacgcagccatg
cttgtcaactggaatgcagtcgatggaaacaagaagttgtacgcaatctatgacacaagc
gcaaacgagccgggcaatatgtcatttgtgaaagagacagtggatagactactaaagggg
tatgacattcgccttcgaccagactttggtggtgccccggttgctgttggaatgagcata
gacgtggcgagcatagacatggtgtccgaggtcaacatggactacacgttgaccatgtac
ttccaacagtactggagggacaagagactggcctacatggggatccctctcaacctgacg
ctggacaaccgcgtggctgaccaactctgggtgccagacacctacttcctgaacgacaag
aagtcatttgtgcatggggtgacggtgaagaaccgcatgatacgacttcatccggatggg
acagtgctctatggcctaaggatcaccacaacggcagcgtgtatgatggacctgaggagg
taccctctggatgagcagaactgcacgctggagatagagagctatggttacaccacagat
gacattgagttttactggaaaggaggagacaacgctgtgaccggagttcaacgtatcgag
ctgcctcagttctctatagtggactacaagctggtctctaggaatgttgtcttttccaca
ggtgcctacccacgtctatctctgagttttaaactcaaacgaaatatcggatacttcatc
ctgcagacgtacatgccctcgattctcatcaccatcctctcctgggtgtccttctggatc
aactatgacgcttcagctgcacgagtagcattggggattacgactgtgctcaccatgact
accatcaacacccatctgcgagagacgctcccaaagatcccctacgtcaaggccatcgat
atgtacctgatgggctgcttcgtcttcgtcttccttgccctgctggagtacgccttcgtc
aactacatcttcttcggccgcgggcctcagatgcagaagaggatggcggagaaggcggag
aaggccaacaacgagcgcgccaaaattgaggccaacaggtctggtgcagagggtggtaaa
acaggcaaacactccaatcaggtgcaagggaaacggatgacgcgagcggttgaatcccat
ggcaacatcttgcttaccaccctggagatccacaacgaggtggcgggcaatgaggttacc
acgagtctggcggacaagcggaactcggtcacgttcgagacgtcgggaatccagtaccgg
aagcagagcgtggcagggcgggagcaccgtgcgccggccaaacgtggccgcctccgacgc
cgctcctcgcagctcaagatcaaaatccccgacctgacggacgtgaacaccatcgaccga
tggtcgcgcatgatattccccggcgctttctccctcttcaatctcatttattggctttat
tatgtcaattag
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