Alosa sapidissima (American shad): 121698143
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Entry
121698143 CDS
T11137
Symbol
tmtops2a
Name
(RefSeq) teleost multiple tissue opsin 2a
KO
K04256
c-opsin
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asad01009
]
121698143 (tmtops2a)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
asad04030
]
121698143 (tmtops2a)
Protein phosphatases and associated proteins [BR:
asad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121698143 (tmtops2a)
G protein-coupled receptors [BR:
asad04030
]
Rhodopsin family
Vision
Opsin
121698143 (tmtops2a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
DUF2975
Motif
Other DBs
NCBI-GeneID:
121698143
NCBI-ProteinID:
XP_041935895
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All DBs
Position
23:25769519..25795378
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AA seq
387 aa
AA seq
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MFSEVANLNYSSNGTGEDSLNYLDQDWNDTPGTLSRTGLNVVAVCLGSIMVFGCLNNLVV
LVLFCKFKTLRTPVNMLLLNISVSDMLVCMFGTTLSFASSIKGRWLAGRHGCMWYGFINS
CFGIVSLISLAILSYDRYSTLTVYNKRAPDYRKPILAVGGSWLYSLLWTVPPLLGWSSYG
LEGAGTSCSVTWRANTVGSHSYIICLFIFCLGVPVLVMVYCYGRLVYAVKQVGRIRKTAA
RRREYHILFMVITTVVCYLVCWMPYGVVAMMATFGPPGLITPIASVVPSLLAKTSTVINP
LIYILMNKQFYRCFLILFHCKHQALENGQSSMPSKTTVIQLNRRAYSKTLVNANATGAPS
TANHHECSSPESDKTNPAEETTQPPSP
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgttttccgaagtggccaacttaaattacagctctaacggaaccggtgaagactctctt
aattatttggatcaggactggaatgacactccgggcacactgtcacgaactggactaaat
gttgtcgctgtgtgtttgggatctattatggtgtttggctgcctcaacaacctagtggta
ctagtcctcttctgcaagttcaagacgcttcgtacaccagtgaatatgctactcctgaac
atcagcgtgagtgacatgcttgtgtgcatgtttgggacgacactcagcttcgcgtctagc
atcaaaggacggtggctggcaggcagacatggatgcatgtggtacggcttcattaactcc
tgtttcggcattgtgtcgctcatctcactggccatcctctcttatgaccgctacagcaca
ctgaccgtctataacaagcgggccccagactaccgcaagcctattctggcagtggggggc
tcctggctctactccctgctctggacagtgccccccctgctgggctggagtagttatggc
ctggaaggtgctgggaccagctgctctgtgacgtggagggcaaacacagtgggctcccac
tcctatatcatctgcttgttcatcttctgcctgggcgtccctgtgcttgtcatggtgtac
tgttatgggaggttggtctatgctgttaaacaggtgggccggatccgaaagacagctgcg
cgacggagagagtatcatatcctgtttatggtgatcaccacggtcgtatgctacctggtc
tgctggatgccctacggcgttgtggcaatgatggccacgttcggcccaccgggactcatc
acacccattgccagtgtggtgccctcgctcctggcgaagaccagcacggtcatcaacccc
ttaatatacatcctcatgaataagcagttctacaggtgtttcctgatcctcttccactgt
aagcaccaggccctggagaacggccagtcctccatgccctctaagaccacggtgatccag
ctcaaccggcgtgcctacagcaagactctggtcaacgccaacgccacaggtgccccgtcc
acggccaaccatcatgagtgcagctccccggagtcggacaagaccaaccccgctgaggaa
accacccagcccccctccccataa
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