Alosa sapidissima (American shad): 121698221
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Entry
121698221 CDS
T11137
Symbol
tbr1a
Name
(RefSeq) T-box brain protein 1
KO
K10174
T-box brain protein 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121698221 (tbr1a)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Other transcription factors
T-box
121698221 (tbr1a)
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Paralog
GFIT
Motif
Pfam:
T-box
T-box_assoc
Motif
Other DBs
NCBI-GeneID:
121698221
NCBI-ProteinID:
XP_041936066
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Position
23:complement(837296..841064)
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AA seq
659 aa
AA seq
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MPLKVCVSPSVMLSDGLMKIGSGYLSYNDSELVNGDHYHPIMSSIDSFERNSPLKSSSSE
LTDHSLVVSLSDVKDSQGGEKGSKRPTAKDEIPEDSQSIDGSNAENYFSSLLCHAQSLSS
SPGAMFPYPGHHGPTHPAFSISPNPYMSHHPVITSGPYGLLSPRQGYPTAGYSYAQQYGH
GEQDGQLYQFSVAPDGLLSGKAQVYLCNRALWLKFHRHQTEMIITKQGRRMFPFLSFNIT
GLDPTAKYNVFVDVILADPNHWRFQGGKWVPCGKTDTNVTANRVHMHSDSPNTGVHWMRQ
EISFGKLKLTNNKGSSSPGQMVVIQSLHKYQPRLHVVELNEDGTEDTNQQNRVQTFTFPE
TQFTAVTAYQNTDITQLKIDHNPFAKGFRDNYDTIYSGLDIDRLTPSPGDPSRPQMIPGT
RYAMASPFFPDQFSPYGKASFNPRNGSAPGLDIDRTSSLNNLVPQQQVDENTTTCAQRWF
VGPAGNRLDFPTSGYDTAARTDFAGAASFLSYTAGVKALSLANASCSSHAFGYYTDPNGW
SSRSPQPNTAKSSSALSCWTHTSTDNRIEKSSYLENNEIADVERSSLQVRENSKPKDRSE
SNWIETPTSDSGDSRIYEHSKRRRVSMRASLETEGLSSSETDSTATTQKCKKDVNYTCF
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgccgctaaaggtgtgtgtctcgccctctgtcatgctctccgacggactaatgaaaatt
ggcagtggttacctgagttataacgattctgaattggtcaatggggaccattaccatccc
ataatgtcatctattgacagctttgagagaaactcgcctctcaagagttcctctagtgag
ctgacggatcattcgcttgtcgtctctttatctgatgtgaaggactcgcaggggggtgag
aagggaagcaagcggcccacagcgaaagacgagatccctgaagatagccaatctatagat
ggatcgaacgccgagaactacttctcatctctgctctgccacgcgcagtccctctcatct
tctccaggtgccatgtttccatacccgggccatcatgggccaactcacccagcgttctct
attagtccgaacccctacatgtcgcatcaccctgtcatcacaagtggaccttacggactg
ctgagtcctcgacaaggatacccaaccgctggttactcttatgcgcaacagtacggacat
ggtgaacaagatggtcagttataccaattttcggtggccccagatggtctgctttcaggc
aaggctcaagtctatttgtgcaacagggcgctgtggctgaaatttcacagacatcaaaca
gagatgattattactaaacaaggacggcggatgttcccatttttaagttttaatatcact
ggccttgatccgacggcgaaatacaatgtgttcgtggatgtcatccttgcggatccaaat
cactggcgttttcagggagggaaatgggtcccatgtggcaaaacggacacaaacgtgaca
gcaaatagggtgcacatgcactcggattcaccgaacacaggagtgcactggatgcgtcag
gagatttctttcgggaaactgaagttaacaaacaacaaaggcagctccagccctggacag
atggtggttatacagtctttacacaagtatcagcccaggctacacgtggtcgagctgaac
gaggatggcacggaagacacaaaccagcaaaacagagtgcaaacctttacctttcccgaa
acacagttcaccgcggtcacagcctaccagaacacagacatcactcaactgaaaattgac
cacaatccatttgcaaagggatttcgtgacaactacgatacaatatactccggcctggac
attgaccggctaaccccgtctccaggtgatccttcacgaccgcagatgatacccgggact
cggtatgctatggccagccctttcttcccagatcagttcagtccctacggcaaggcttcc
tttaaccctaggaatggatctgcccctggtcttgacattgaccgaacgtcttctctaaat
aacttggtgccgcagcaacaggtcgatgagaataccacaacgtgtgcgcagcgatggttc
gttgggccagcgggtaatcgacttgacttccccacatctggatacgacacggctgcacga
acagactttgcaggtgcggcatcatttttgtcctacacggcgggagtgaaggcattgtca
ctggccaatgccagttgttccagtcatgcatttggctattacaccgatcctaatggttgg
tcttcgcgtagtccacagcccaacactgcgaaatcctcatctgctctatcatgctggaca
catacctccaccgataaccgaattgaaaagtcaagttatttggagaataacgagattgcc
gacgtggagaggtcgtccttgcaggtgcgcgagaattccaaacccaaggacaggtcggaa
tctaactggatagaaactccaacctcggactccggtgactctcgtatttacgagcacagc
aaacgaaggagagtatctatgcgggcatctttggagacagagggtctgtcctcttcagaa
actgattctaccgccaccacccagaaatgcaaaaaggatgtaaattacacatgcttttaa
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