Alosa sapidissima (American shad): 121698250
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Entry
121698250 CDS
T11137
Symbol
rbb4l
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03082
ATP-dependent chromatin remodeling
asad03083
Polycomb repressive complex
asad04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121698250 (rbb4l)
03083 Polycomb repressive complex
121698250 (rbb4l)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
121698250 (rbb4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asad03036
]
121698250 (rbb4l)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
121698250 (rbb4l)
Histone modification proteins
HAT complexes
HATB complex
121698250 (rbb4l)
HDAC complexes
Sin3A-HDAC complex
121698250 (rbb4l)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
121698250 (rbb4l)
PRC2.2
121698250 (rbb4l)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
121698250 (rbb4l)
Heterochromatin formation proteins
Other heterochromatin formation proteins
121698250 (rbb4l)
Chromatin remodeling factors
NuRD complex
121698250 (rbb4l)
NuRF complex
121698250 (rbb4l)
NuRF complex (fruit fly)
121698250 (rbb4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
EIF3I
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
eIF2A
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_DCAF12
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
121698250
NCBI-ProteinID:
XP_041936121
LinkDB
All DBs
Position
23:complement(23367637..23378706)
Genome browser
AA seq
427 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
AVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDISGSPKEGKIIDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTAKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEQDTPAS
ELEGQAS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaagaggtgtatgacgatgctgtggaggagagggtcatcaacgaagaatac
aaaatttggaaaaagaacacgccgtttctgtatgatctggttatgacacacgcccttgaa
tggcccagtctcacagttcagtggctgcccgatgtaaacagaccagagggaaaggactac
gctgtccacaggctggtgttggggacacacacctccgacgaacaaaatcacttggttatt
gcgagtgtccagatccctaatgatgatgcacagtttgacgcttctcattacgacagtgaa
aaaggagcagagtttgggggttttggatctgtgagtggtaagattgaaattgagatcaag
atcaaccatgagggtgaggtgaaccgtgcacgctacatgcctcagaacccctgcattatc
gccacaaagacgcccacctccgatgttctggtgtttgactacaccaagcacccctccaaa
ccagaccccagtggagagtgcagtccagatctgaggctgcgagggcatcagaaagagggc
tacggcctctcctggaaccctaacctcagcggcaacttgttgagcgcatcagacgaccat
accatctgcctgtgggacatcagtggtagtccgaaggaagggaagatcatcgatgctaag
accatcttcactggacacacagctgtggtggaagatgtatcctggcacctgctccacgag
tctctctttggctctgtggcggatgaccagaagcttatgatctgggatactcgatctaac
aacacagcaaagcccagccattcggtggatgcccacaccgcagaggtcaactgcctgtcc
ttcaacccctacagcgagttcattctggccactggctcagctgacaagacggtggctttg
tgggacctccgcaacctgaaactgaagctgcactcctttgagtcgcacaaggatgagatc
ttccagcaggtacaatggtcccctcataacgagaccatcctggcatccagtggcacggac
cgacgactcaatgtgtgggacctgagtaaaatcggggaggagcagtcagctgaggatgca
gaggacggacctcctgagctcctgtttattcatggtggacacacagccaagatctctgac
ttttcctggaatcccaatgaaccatgggtgatctgctcggtgtcagaggataacatcatg
caggtttggcagatggcggaaaatatttacaacgatgaggaacaagacacccctgcttca
gagctggaggggcaggcctcataa
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integrated database retrieval system
