Alosa sapidissima (American shad): 121698341
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Entry
121698341 CDS
T11137
Symbol
gbx2
Name
(RefSeq) homeobox protein GBX-2
KO
K09321
homeobox protein GBX
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121698341 (gbx2)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121698341 (gbx2)
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GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
DUF7645
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
121698341
NCBI-ProteinID:
XP_041936306
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Position
23:26001865..26004962
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AA seq
341 aa
AA seq
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MSAVFSPSFMMMQRPVGSTTAFSIDSLIGGPPQPSPGHFVYTGYPMFMPYRSVVLPPPPP
PPPALSQSALQGLPSTHPHHQIPGLPSSFCSSLAQGMALTSTLMATLPGGFPASPQQQEA
VRKFAPQSLHAAFDKTQEMRLDADDGKSFLGKESSLSSFHDTESLQSVTARNHSKDDGKE
DECTRKEDSYTMDSDLDYSSDDNASGSAMCQKDDGDASGGMDDGAHGPSGTGSTTSTGKN
RRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKA
GNVNSKNGEPSRNPKIVVPIPVHVSRFAIRSQHQQLEQARP
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtttttagcccatcattcatgatgatgcaacgtccagtgggaagcaccacg
gccttcagcatcgactccctaatcggtggtccccctcaaccaagcccaggacattttgtt
tacactggctaccccatgttcatgccgtataggtcagtagtgctccccccgccgccccct
ccaccgcctgccctctctcagtccgcgctccagggtctgccgtccacgcacccgcaccac
cagatccccgggttacccagcagcttctgctccagcttggcgcagggcatggcgctgaca
tccacgctcatggctacgctgcccggcggattccccgcgtccccgcagcagcaggaggcg
gtgaggaagttcgctccccagtccctccatgctgcctttgacaaaactcaggaaatgcgc
ttggacgcagatgacgggaaaagcttcctgggaaaggagtcttctctctcgtcattccac
gacacagagtccctgcagtctgtcacagccagaaatcacagtaaagatgatggcaaagag
gacgagtgtacccgtaaagaggacagttatacaatggacagcgatctagactacagctca
gacgacaacgccagtggcagtgccatgtgtcaaaaggacgacggagacgcgagcggtgga
atggacgatggtgcccatggaccgagcggaactgggagcaccacgtctactgggaagaac
cgacgacgacggacagccttcaccagtgagcaactgttagaactggagaaggaatttcat
tgtaagaagtacctctctctcacagaacgctctcagattgctcacgcgttaaagctcagc
gaggtacaggtcaaaatctggttccagaaccgacgagccaagtggaaacgcgtgaaagcc
ggaaacgttaactctaaaaacggagagccctccagaaatcccaaaattgtggtgcccatc
cctgtgcacgtcagccgctttgcaatacgaagtcagcaccagcagttagagcaagcgagg
ccttga
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