Alosa sapidissima (American shad): 121698385
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Entry
121698385 CDS
T11137
Symbol
gtf3c3
Name
(RefSeq) general transcription factor 3C polypeptide 3
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asad03021
]
121698385 (gtf3c3)
Transcription machinery [BR:
asad03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
121698385 (gtf3c3)
TFIIIC, fungi type
121698385 (gtf3c3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_16
TPR_1
TPR_19
TPR_11
TPR_17
TPR_CcmH_CycH
TPR_12
TPR_9
ANAPC3
TPR_EMC2
ChAPs
Motif
Other DBs
NCBI-GeneID:
121698385
NCBI-ProteinID:
XP_041936378
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All DBs
Position
23:17046437..17060067
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AA seq
935 aa
AA seq
DB search
MMSEFSPELIDYLDGKISFEEFEKRRSERKAKEKESKKGSQGSGSGDGEDATGDGEDVSP
STSRDVRKTRKRRTGETEEGISPSVHQAFASMLGEGGYEEDEEDEEEEEEDDDDDDEDYD
AEEDFNKDKEDNEDGEGEEDADDAETDGITAGDVFALEMELNRENKKMMKEKRHRSKLPR
ALRGLMGEANIRYARGDKEDAILMCMEIIRQAPLAYEPFSTMAMIYEDQGDMEKALQFGL
IAAHLNPSDCEEWVKLADMSLEQDNIKQAIICYSKAIKYDPTNVRFLWERSSLYEQVGEH
KQAMDGYRRILNLLPPHDGEHFMQLSKDMAKSYYESSELPSAIGVMEEALKRHPELVTHE
CINMAAELYIANHQHTKAMKALVKFCGIELKKKEELKTSPEEQQVEMEEKVEEGQEKEEE
KVEEETEEPLGEVLEVIVPDEVPVDIRVKLMVCFIHQHVYKPLDPMLTSLMEQSPEELGD
LYLDVAEAFLDEGEYNSALPLLSALVCSERYNLAVVWLRHAECLKALGHLEVAVRSYLKV
VEMAPLHLEARLSLSTLQQQLGRPESALQALESMYDPEMLAQDSGAVQQELKLLLHRSTL
LLSQGKQADYVDTLLTMLAMLLKTAMVRARVCLISDSNHLRVTKISGRKRPDNEQEAAYQ
DIVGKSSVLSREDWWQLLLRCMNILCENRRFCEAELLVDSSLNYDTFYDDRVKRKEMGYL
GLSTSFLDRNYVKAYDYIRLMLMDSVDRTQLWNTFNQVTLHSQDVRHHRFCLRLMLKNPE
NLALCVLNGHASLVSGSFKHALGQYVQAFRMQPDNPLHSLCVGLTFFHMASQKFVIKRHS
LVMQGFSFLWRYVERRGHCQESMYNVGRALHQLGLTHLAIHYYQKALTFPAPTLEGIDDD
QLDLRQEIAYNLSLIYQSSGNMELARHLIYTHCVI
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcggaatttagccctgaacttattgattatttagacggaaagatctcattcgag
gaatttgagaaacgaagatcagagcggaaagcgaaggagaaggagagcaaaaaggggagt
caggggtctggatccggtgatggtgaagatgcaacaggcgatggagaggatgtctcacca
agcacatcgcgcgatgttcgaaaaacacgtaaacggcgcaccggtgaaacagaggagggg
ataagtccctctgtacatcaggcttttgcctccatgcttggtgaagggggttatgaggag
gatgaggaggatgaggaggaggaggaggaggatgatgatgatgatgatgaagactatgat
gcagaggaagacttcaataaagacaaagaggataacgaggatggagaaggggaggaagat
gctgacgatgctgagacagacggcatcacagcaggggatgtgtttgccctggagatggaa
ctcaatcgtgagaataagaagatgatgaaggagaagcgccataggagtaaactgccacgg
gctcttcgaggactcatgggtgaagccaacatccgctatgcccgcggagacaaggaagat
gccatcctaatgtgcatggagatcattcgacaagcacccctggcttatgagcccttctcc
accatggccatgatctatgaggaccagggtgatatggagaaagccctccagtttggcctg
atagctgcgcacctcaatcccagcgattgtgaagagtgggtcaagttagccgacatgtcc
ctggagcaggataacatcaagcaagccatcatctgctactccaaagctatcaagtacgac
ccgacgaacgtgcgtttcctgtgggagcgctccagcctgtacgagcaggtgggcgaacat
aagcaggccatggacggctaccgccgcatcctcaacctgctgccaccccacgatggagag
cacttcatgcagctgtcaaaggacatggccaagagctattatgagagcagtgagctgccg
tcagccatcggcgtgatggaggaggccctgaagcgccacccagagctggtcactcacgag
tgcatcaacatggcggccgaactctacatcgccaaccaccagcacaccaaagcaatgaag
gctttagtgaagttctgtgggattgagctgaagaagaaagaagagctgaagacgagtcca
gaggagcaacaagtagaaatggaagaaaaggtggaagaagggcaggagaaagaggaggag
aaagtagaggaagagactgaagaaccacttggggaggtgttggaggtcattgtcccagac
gaagtgcctgtggacatcagagtgaagttgatggtgtgctttatacatcagcatgtttac
aagcctctggatcccatgctgacctctctgatggagcagagcccggaggagctgggggat
ctgtacctggacgtggccgaggccttcctagacgaaggcgagtacaactcggccctgccg
ctcctctcagcgctcgtgtgctccgagaggtacaacctggccgtggtctggctcagacat
gcagagtgtctaaaagctctgggccacctggaggtggcggtgcggagctacttgaaggtg
gtggagatggcccctctccacttggaggcgcgcctctccctgtccaccctgcagcagcag
ctgggacggcctgagagtgcccttcaggccctggaatccatgtacgaccccgagatgctg
gcccaggactccggcgctgtgcaacaggaactgaagttgctgctccatcgctccactctc
ctcctctcccagggcaaacaggctgactatgtggacactctgttgaccatgctggccatg
ctactgaagacagccatggtacgtgccagggtgtgtttgatctctgactctaatcacctt
cgtgtgaccaaaatctctggacgtaagaggcctgacaatgagcaggaagcagcctatcag
gacattgtcgggaagtcaagtgtgttgtcgcgagaggactggtggcagctcctgctgcgc
tgcatgaacatcctctgtgagaaccgccgcttctgtgaggccgagctcttggtggactcc
tcgctgaactatgacactttctacgacgaccgggtcaagcgcaaggagatgggctacctg
ggcctgtccacttccttcctggaccgcaactacgtcaaggcgtatgactacatcaggctg
atgctgatggactctgtggaccggacccagctgtggaacacgttcaaccaggtgacgctg
cactcgcaggacgtgcgccaccaccgcttctgcctgcgcctcatgctcaagaaccccgag
aacctggcgctgtgcgtgctcaacggacatgcatcgctcgtctccggcagcttcaagcac
gcccttggccagtatgttcaggccttccgcatgcagccggacaaccctctccacagtctg
tgtgtgggcctcaccttcttccatatggcatcgcagaaatttgtcatcaagcgccactct
ctagtcatgcagggtttctcgttcctgtggcggtatgtggagcggcgggggcactgccag
gagagcatgtacaacgtgggccgtgcgcttcaccagctgggcctcacccatctggccatt
cactactaccagaaagccctgactttccccgcacccacactggagggaattgatgatgac
caactggatctgcgccaagagattgcctacaacctgtcactcatctatcagtccagtggt
aacatggaattggccaggcacttgatatacacccactgtgttatttag
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