Alosa sapidissima (American shad): 121698553
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Entry
121698553 CDS
T11137
Symbol
desmb
Name
(RefSeq) desmin b isoform X1
KO
K07610
desmin
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121698553 (desmb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121698553 (desmb)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
121698553 (desmb)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF7491
DUF4515
DUF1664
TolA_bind_tri
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
121698553
NCBI-ProteinID:
XP_041936679
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Position
23:28474820..28504550
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AA seq
485 aa
AA seq
DB search
MSRYASSSAAQSSSYRRTFGSPGFVSTPAGRNLYGSHTSLGGLGGSSGGARVSSRVYEVH
KTSTAATPGYGGSYRASYGIPGLTSASAASAGRYAGMGETLDFSLADALNQEFLATRTNE
KAELAHLNDRFASYIEKVRFLETQNQALVIEIERLKGREPTRIADLYEEEMRELRRQIEM
LTNQRSRIELERDNLADDLDKIRLRLQEEILQREEAESNLTAFRADVDAATLARLDLERR
IETLQEEISFLKKIHEEEIRELQSQMQETQVQIQMDMSKPDLTAALRDIRAQYEAIAAKN
ISEAEDWYKSKVTDLNQAVSKNNEALKQAKLETMEFRHQIQSYMCEIDSLKGTNESLLRQ
MQDMEDRHGRDAGGFQETITRLEAEIANMKDEMARHLREYQDLLNIKMALDVEIATYRKL
LEGEESRISRPMQAYSSMSFRETSPEHQRASSSELHSKRSVLIKTIETRDGEVVSESTQH
QEDHL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctacgcgtcctcctccgccgcccagtcctcctcctaccgccgcaccttcggc
agccccggcttcgtgtccactccggccggacgcaacctctacggctcacacacctccctg
ggaggtctgggtgggtcgtccggcggggcccgcgtctcgtcccgcgtctacgaggtccac
aagacgtccaccgcggccactcccggctacggcggctcttatcgggcctcatacggcatc
ccggggctgacctctgcgtccgccgcctccgcaggccgctacgccggcatgggcgagacg
ctggacttcagcctggcggacgcgctgaaccaggagttcctggccacacgcaccaacgag
aaggcggagctggcgcacctgaacgaccgcttcgccagctacatcgagaaggtgcgcttc
ctggagacgcagaaccaggcgctggtgatcgagatcgagcggctaaagggccgcgagccc
acgcgcatcgccgacctctacgaggaggagatgcgtgagctgcggcgccagatcgagatg
ctgaccaaccagaggtcccgcatcgagctggagagggacaacctggccgacgacctggac
aagatcagactcagactacaggaggagattttacaaagagaggaggcggagagtaacctt
acggctttcagagcagacgtggacgctgccaccttggcccgcctggacctggagagacga
atcgaaacccttcaggaggagatctccttcctaaagaagatccacgaagaggagatccgt
gagcttcaatcccagatgcaggagactcaggtgcagatccagatggacatgtctaagcca
gatctgaccgccgctctgagggacatcagagcccagtacgaggccatcgccgccaagaac
atctccgaggctgaagattggtacaagtccaaggtgacagacttgaaccaggcggtgtcg
aagaacaacgaggccctgaagcaggcgaagctggagaccatggagttcagacatcagatt
cagtcctacatgtgtgagatcgactcgctcaagggcacaaacgagtctctgctgaggcag
atgcaggacatggaggatcgtcacggccgcgacgcgggcggtttccaggagaccatcaca
cgtctggaggcggagatcgccaacatgaaggacgagatggcgcgccacctgcgcgagtac
caggatctgctcaacatcaagatggccctggacgtggagatcgccacctacaggaagctc
ctggagggagaggagagcaggatctctaggcccatgcaggcctactccagcatgagcttc
agagagaccagccctgagcaccagcgcgcctcctcctctgagctgcactccaagagatcc
gtccttatcaagaccatcgagacccgcgatggagaggtggtcagtgagtccacacagcat
caggaggatcacctgtag
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