Alosa sapidissima (American shad): 121698567
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Entry
121698567 CDS
T11137
Symbol
zeb2b
Name
(RefSeq) zinc finger E-box-binding homeobox 2b isoform X1
KO
K23560
zinc finger homeobox protein 2
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asad03000
]
121698567 (zeb2b)
Transcription factors [BR:
asad03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
121698567 (zeb2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_6
zf-C2H2_15
Csm1_N
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
121698567
NCBI-ProteinID:
XP_041936703
LinkDB
All DBs
Position
23:complement(12214948..12299270)
Genome browser
AA seq
1254 aa
AA seq
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MKQLIMADGPRCKRRKQANPRRKNAVLNYENVVETGSETEEDDKLLVSEEDGLLNGAASP
ISVANHEAGSPLAGHTLLTKPDDDDDDMRDSGVDHVWHESDMLRASVDGTDEMKDDFDTM
GPDATLQTVGNGTVKNVDCTSDFEEFFAKRKLDDSESHVVSIAEYLQRGDTAIIYPEAPE
ELSRLGTPEANGQEENDLPPGTPDAFAQLLTCPYCDRGYKRLTSLKEHIKYRHEKNEENF
ACPLCNYTFAYRTQLERHMATHKPGRDQHPMLNQGAGNRKFKCTECGKAFKYKHHLKEHL
RIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLITVNGRMRNNMKTGSSPTSASSSP
TNSAITQLRHKLENGKPLGLQDQSNHMDIKTEPLDFNDYKMMLASHGFGGPGGGGGPFMN
GGSGGGGSPLGVHPYNSAQSPMQHPLGMTMEGQLLGYPHLSNNLSEVQKVLQIVDNTVCR
QKMDCKPEDISKLKAYMKDLSAQMEEHKQGLTSPGGGPPVGLPVVNHNGATKSIIDYTLE
KVNEAKACLQSLTTDSKRQFSNIKKEKSNHTVDIGTDEKKMNENNLMFTPYSCQYCKEAF
AGPIPLHQHERYLCKMNEEIKAVLQPNENMTPNKPGMFAEKHAMLLSSIISDKAMTGPVN
PYKDHMSVLKAYFAMNMEPNSEELLKISIAVGLPQEFVKEWFEQRKVYQYGNGRTPPMDR
GMEVGLPATNHTPIKDSMNARSPVSLVKPPDHITSPTLAELHNNVNNCDTPLRLSKTAHF
TGTKQMAEKLDHHSRSNTPSPLNLSSASSKNSHSSSYTPNSFTSEDLQAEPLDLSLPKLM
REAKHILTMKSHPKPNSVPIDHNNISSHREHLEEPLNLAYLSKKEFAASNGNNNGNLDKS
TSHMFGINPFSAKPLYTQLPPQSAFPPPTFMPPVQASIPGLRAYPGLDQMGFLPHMAYTY
AAGAATFAEMQQRRKYQRKQGFQGELLDGTGEYLSGLDDMTDSDSCLSRRKIKKTESGMY
ACDLCDKTFQKSSSLLRHKYEHTGKRPHQCQICKKAFKHKHHLIEHSRLHSGEKPYQCDK
CGKRFSHSGSYSQHMNHRYSYCKREAEEREAAEREAREKGHLEPTELLMNRAYLQGITPP
GYPDLEDREREREREREHERERERERERDALLREGMNGGMRERPKEVDGTYAKIGRREDE
FEEEEEESENKSMDTDPDTLRDEEENGDHSMDDSSVDGKTETKSDHEDNMEDGM
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagctgatcatggcggatggccccaggtgtaagaggcgaaaacaagccaaccca
agacggaaaaacgcagtcttgaactatgagaacgtggtagaaaccggttccgagacggag
gaggacgacaagctgctggtgtccgaagaggacggcctgctgaacggcgccgccagtccc
atcagcgtggccaaccacgaggccggctccccgctggccggccacaccctgctgaccaag
cccgacgacgacgacgacgacatgagggacagcggggtcgaccacgtctggcacgaaagc
gacatgctgcgagcctcagtcgatggtactgatgaaatgaaagatgactttgacactatg
gggcctgatgccactcttcaaacagttggaaacggtacagttaagaatgttgattgcact
tcagacttcgaggagttctttgccaaacgcaagctggacgacagcgagagccacgtggtc
agtatagccgagtatctccagcgcggggacacggccatcatttacccagaagcccctgaa
gaactgtcccgcctgggcacgcccgaagccaacggccaggaggagaatgacctaccacct
ggaactccagatgctttcgcgcaactgctgacctgcccctactgtgaccggggctacaag
cgtttgacatcgcttaaggagcacatcaagtaccgccatgagaagaacgaggagaacttc
gcctgcccactgtgcaactacacgtttgcttaccgcacccagctcgagcgacatatggca
acgcacaagccaggaagagatcagcacccaatgctgaaccagggggctggcaaccgcaag
ttcaaatgcaccgagtgtggcaaggccttcaaatacaagcaccatctgaaggagcacctg
cggattcacagtggtgagaaaccgtacgaatgcccgaactgcaagaagcgcttctcccat
tcgggctcctacagctcccacatcagcagcaagaagtgcatcggcctgatcacggtcaac
ggccgcatgcgcaacaacatgaagacgggctcctcacccacatccgcctcctcctccccc
accaacagcgccatcacccaactgcggcacaagctggagaacgggaagcccctgggcctc
caggaccagtccaaccacatggacatcaagaccgaaccactggacttcaacgactacaag
atgatgttggcctcacacggctttggagggcccggaggtggcggggggccgttcatgaat
ggtgggtcagggggcgggggaagcccactcggggtccacccttacaactcggcccagagc
cccatgcagcaccccctggggatgaccatggagggccagctgctcgggtacccgcacctg
agcaacaacctgagcgaggtgcagaaggtgctccagatcgtcgacaacactgtgtgcagg
cagaagatggactgcaagcccgaggacatctccaagctcaaggcgtacatgaaggacctc
agcgctcagatggaggagcataaacagggactgacctcccctgggggcggcccacccgtg
ggcctgcccgtggtcaaccacaacggagccaccaagagcatcatcgactacacgttagag
aaggtgaacgaagccaaagcctgcctgcagagcttgaccacggactccaagagacaattt
agcaatatcaaaaaggagaagtcgaatcacacagtagacataggtacagatgagaagaag
atgaatgagaacaacttaatgtttacaccttattcttgccaatactgcaaagaggccttc
gcaggtcccatccctctgcatcagcacgagcgctacctgtgcaagatgaacgaggagatc
aaggcggtcctccagcccaacgagaacatgacgcccaacaagccggggatgtttgcggag
aagcacgccatgctgctctcgtccatcatctccgacaaggccatgacggggcctgtcaat
ccgtacaaggaccacatgtctgttctcaaggcctacttcgccatgaacatggagcccaac
tccgaggagcttctcaagatctccattgctgtggggctccctcaggaatttgtcaaggag
tggttcgagcagaggaaagtgtaccagtacggcaatggcaggacgcctcccatggatagg
ggcatggaggtggggctgcccgctaccaaccacaccccaattaaagactccatgaacgcc
aggtccccagtgtccctggtcaagccgcccgaccatatcacgtcgccgactctggcggag
ctccacaacaacgtcaacaattgtgacactcccctcaggctgtcaaaaaccgcccatttt
accggaaccaaacagatggcagagaagttggaccaccactcccgcagcaacactccatcc
ccgctgaacctctcctccgcgtcgtcgaagaactcccacagcagctcgtacacgccaaac
agcttcacgtccgaggacctccaggccgagccattggacctatcactgccaaaactcatg
agggaagccaagcacatcctgaccatgaaaagccaccccaaacccaacagtgtccccatt
gaccacaacaacatctcctcccaccgggagcacctggaggagcccttgaatctggcctac
ctgtccaagaaggagtttgccgcctccaacggcaacaacaacggcaacctcgacaaaagc
actagccacatgtttggcatcaacccgttcagtgccaaacctttgtacacacagctgccc
ccacagagtgcgttccccccgcccaccttcatgcccccggtgcaggccagcatacctggc
ctgagggcgtacccgggactcgatcagatgggcttcctgccacacatggcctacacatac
gccgcaggggctgccacctttgctgagatgcagcagaggcgaaagtaccagcgaaagcaa
ggtttccagggggagctgcttgacggcacaggagaatatttgtctggcctggatgacatg
acagactcagactcctgtctgtcccggaggaagattaagaagacagaaagtggtatgtac
gcgtgtgacttgtgcgacaaaacattccagaagagcagttccctcctaagacacaaatat
gagcacacaggtaaacgaccgcaccagtgtcaaatctgcaagaaggcgttcaaacacaag
caccatctgatcgagcactcgcggctgcactcaggcgagaagccctaccagtgtgataag
tgcggcaagcgcttctcccattcggggtcgtactcgcagcacatgaaccaccgctactcg
tactgcaagcgggaggccgaggagagggaggcggccgaacgcgaggcccgagagaagggt
cacctggagccaacggagctgctgatgaaccgggcctacttgcagggcatcacgcctccg
ggctacccagacctggaggatcgggaaagggagcgcgaacgggaaagagagcatgagcgg
gaacgggagagagaacgagaacgggacgccctcctacgcgagggcatgaacggaggtatg
agagaacggccgaaggaagtggacggaacgtacgcaaagataggacgacgggaagacgag
ttcgaggaggaggaggaggagagcgagaacaagagcatggacacagacccagacacgttg
agggacgaggaggagaacggtgaccactccatggacgacagttcggttgacgggaaaact
gaaaccaaatctgatcacgaggacaatatggaggacggcatgtaa
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