Alosa sapidissima (American shad): 121698599
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Entry
121698599 CDS
T11137
Symbol
dkc1
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121698599 (dkc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asad03009
]
121698599 (dkc1)
03032 DNA replication proteins [BR:
asad03032
]
121698599 (dkc1)
Ribosome biogenesis [BR:
asad03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
121698599 (dkc1)
Prokaryotic type
121698599 (dkc1)
DNA replication proteins [BR:
asad03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
121698599 (dkc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
PUA_elF2D
UPF0113
DUF3602
Motif
Other DBs
NCBI-GeneID:
121698599
NCBI-ProteinID:
XP_041936769
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All DBs
Position
23:29134982..29142103
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AA seq
534 aa
AA seq
DB search
MRRYAHVFLCDCVAKMADGEVKKEKKKKQKVADHEVGDIQESGDFLIKPESKVASLDTSQ
WPLLLKNFDKLNIRTAHYTPIPNGCNPLKRNIHDYVRSGFINLDKPANPSSHEVVAWIKR
ILRVDKTGHSGTLDPKVTGCLIVCVDRATRLVKSQQSAGKEYVGIVRLHNAIESEHQLLR
AMECLTGALFQRPPLIAAVKRQLRVRTIYESKLIEYDPERRLGIFWVSCEAGTYIRTLCV
HMGLLLGVGGQMQELRRVRSGVMGEKDNLVTMHDVLDAQWQFDHNKDESYLRRVIFPLEK
LLISHKRIVMKDSAVNAICYGAKIMLPGVLRYEDGIEINQDIVVITTKGEAICTAVALMT
TAVISTCDHGVVAKIKRVIMERDTYPRKWGLGPKASQKKMMIQKGLLDKHGKPNGSTPAE
WTDSYVDYGAKKAAAAKKGDEPATPAKRKRVESGSDGEGNATEPSTPVTPKTDDELKKEK
KKKKKEKKMKLAQEAPAAEAAQEEPAAEPSEEAGESAKKKKKKKKQKEEEQASE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagatacgcacacgtgttcctgtgcgactgcgttgcgaagatggcggacggtgaa
gtgaagaaagagaagaaaaagaagcagaaagttgcagatcatgaagttggggacattcaa
gagtctggcgattttctcatcaagccagaatctaaagtagctagtttggacacatctcag
tggcctctgttattgaagaattttgacaaactaaacatcaggactgcacattacactccc
attccaaatggatgcaacccactgaagaggaacatacacgattatgtcaggtcgggcttc
attaacctcgataaacctgccaacccgtcctctcacgaagtggtggcatggatcaagcgc
atcctgcgagtcgacaaaactggccacagcggcacgctcgatcccaaagtcaccggctgt
ctgatcgtgtgcgtggaccgtgccaccagactggtcaagtcccaacagagtgccggcaaa
gagtatgtgggtatagtacggctgcacaatgccatcgagagcgagcaccagcttttgagg
gccatggagtgcctcacgggggcgctgttccagcgacctcccctcattgctgcggttaag
aggcagctgcgagtgcgcacaatctacgagagcaagctcatcgagtacgaccctgagagg
agactaggcatcttctgggtgagctgtgaagcgggcacctacatcaggacgctgtgtgtg
cacatgggcctgttgctgggcgtcgggggccagatgcaggagctgcggagggtccgctcc
ggagtgatgggagagaaggataacttggtgaccatgcatgacgtgctggatgcccagtgg
cagtttgaccacaacaaggacgagagctacctcaggcgtgtgatcttccccctggagaag
ctgctcatctctcacaagaggatagtcatgaaggatagtgcggttaatgctatctgctac
ggcgccaaaatcatgctcccaggtgtcctccgatatgaagatggcatcgagatcaaccaa
gacatcgtagtaatcaccaccaagggggaggccatttgtacagcggttgcacttatgaca
acggcggtcatttctacctgtgaccatggagtcgttgccaagatcaagagggtcatcatg
gagagggacacgtaccctcgcaagtggggacttggacccaaggctagccagaagaagatg
atgatccagaagggcctcttggacaaacacgggaagccaaacggcagcacacctgcagag
tggacagacagctatgtggattacggtgcaaagaaggctgcagctgcaaagaagggcgac
gagccagcaacacctgcaaagcgcaaaagggtagagagtggaagcgacggtgaggggaac
gcaacggaaccttcaacgcctgtgacgcccaagactgacgatgagctgaagaaggaaaag
aagaaaaagaaaaaggagaagaaaatgaaactggcgcaagaggcgcccgcagccgaggcg
gcgcaagaggagcccgcagcagagccaagcgaagaggctggtgaaagtgcaaagaagaaa
aagaagaagaagaaacagaaggaggaggagcaagcgtctgagtga
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