Alosa sapidissima (American shad): 121698601
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Entry
121698601 CDS
T11137
Name
(RefSeq) histidine--tRNA ligase-like isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121698601
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
asad01007
]
121698601
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
asad03016
]
121698601
Enzymes [BR:
asad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
121698601
Amino acid related enzymes [BR:
asad01007
]
Aminoacyl-tRNA synthetase
Class II (A)
121698601
Transfer RNA biogenesis [BR:
asad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
121698601
Prokaryotic type
121698601
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
tRNA-synt_2
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
121698601
NCBI-ProteinID:
XP_041936771
LinkDB
All DBs
Position
23:complement(29468638..29479675)
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AA seq
505 aa
AA seq
DB search
MIFTEAPPREAHSRSNCLATQDAQFILSLVRIRSSMAEKAQKQETDEKGDEGKYLLKTPK
GTRDYNPKQMAIREKVFNTITNSFKRHAAETIDTPVFELKETLMGKYGEDSKLIYDLKDQ
GGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDVAG
QYDPMIPDAECLKIIYEILTELDLGNFQIKVNDRRILDGMFSVCGVPDDKFHTVCSSVDK
LDKMLWAEVKTEMVKEKGLPESVADMIGEYVSKKGGLELAEKLLEDPKLSMSEPALAGLK
DIKLLFGYLQLFKITDKVVFDLSLARGLDYYTGAIFEAVLTGDGSGGAGQDINVGSVSGG
GRYDGLVGMFDPKGRNVPCVGFSIGIERIFSIVEQKTEAKGVKVRTTETQVMIASAQKNL
LEERLKLTAELWDAGIKAEVMYKENPKLLSQLQHCEETGIPLVAILGEQELRDGIVKLRN
VANREEVDISRANLVEEIKKRTSQS
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgatattcacagaagctccgcctagagaagcacacagtcgcagcaactgtcttgcaaca
caggacgctcagttcattctttcactggtccgtataagaagcagcatggctgagaaggca
cagaaacaagagactgatgagaagggagatgaaggcaaatacctcctcaagacccccaag
ggcactagggactataacccaaagcagatggccattagggagaaggtgttcaacaccatc
accaacagcttcaagcgtcatgcagccgagaccatcgacacgccggtctttgaactgaag
gaaacattaatggggaagtacggagaagactccaaactgatttatgacctgaaggaccag
gggggagaactcctgtccctcagatatgacctcaccgtgccattcgcccgttacttagcc
atgaacaaaatcactaacatcaaacggtaccacatcgccaaggtgtatcgccgtgacaac
ccagctatgacccgtggacgctatcgcgagttctaccaatgcgattttgatgtagctggg
cagtacgatcccatgattcctgatgcagagtgtctgaagataatctacgaaatcctaact
gaactggacctggggaacttccagatcaaggtaaatgacagaaggatcctggatggcatg
ttcagtgtgtgtggagttcctgatgacaagttccacaccgtctgctcctctgtggacaaa
ctggacaagatgctatgggccgaggtgaagactgagatggtgaaggagaaaggactccca
gagagtgtagcagatatgattggagagtacgtcagcaagaaaggtggactggaactggcc
gagaagctgttggaggaccctaagctgtctatgagtgaacctgctcttgctggcctcaag
gacatcaagcttctcttcgggtacctgcagctcttcaagatcacagacaaggtggtgttt
gacctgtctctagcgcgcgggctggattactacacaggtgccatcttcgaggctgtgctg
accggtgatggcagtggcggcgcgggacaggacatcaatgtgggcagtgtttctgggggt
ggccgttacgatggcctggtggggatgttcgaccccaagggccgcaacgttccgtgcgta
ggcttcagcatcggcatcgagaggatcttctccatcgtggaacagaagacggaggctaaa
ggtgtgaaggtccgtacaacagaaacacaggtaatgatcgcctcagctcagaagaacctt
ctggaagagagactcaaactcactgcagagttgtgggatgcagggataaaggcggaggtg
atgtacaaggagaaccctaaactcctgagccagctgcagcactgtgaggagacgggcatc
ccgctggtggccatcttgggagagcaggagctccgggatggcatcgttaaactgcgtaac
gtcgccaacagagaagaggtggacatctcaagagcaaacctggtggaggagatcaagaag
agaacctctcagtcataa
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