Alosa sapidissima (American shad): 121698701
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Entry
121698701 CDS
T11137
Symbol
lin54
Name
(RefSeq) protein lin-54 homolog
KO
K21776
protein lin-54
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
121698701 (lin54)
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Gene cluster
GFIT
Motif
Pfam:
TCR
MSL2-CXC
Motif
Other DBs
NCBI-GeneID:
121698701
NCBI-ProteinID:
XP_041936941
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Position
23:20392250..20408637
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AA seq
796 aa
AA seq
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MDVVPPELNSLLPDEIMDTEAIVTDDDLPAVCPAPPNPLETQDAPVPMETEVPEIVTLCT
AAPSIPVQRTQALTTLTSTDSTPSSGTGSTGTQLLLTPSSSTMTLQPTSLTLTAPKPSSP
QVTGSLQKLSTPLALPANHQLILNKVASSPGSEAKPTMLKPDGQKLVLTALGKAGQPIVL
ALPPGAGKAGTMLSPGDGKGQPPQFKVVTIGGRTDLKPIGVQAVSTASQLIGTSQTAQQG
QQLKTLQITKKIPVSTAAPVITKYIITKALNSKGLTSQTSVSPVVTGRVLTQSTPGTPPR
TITVADALSTSGGSKVAISPLKSPSKLTVVSVASPSPTSPQKSVAVPLSVALGQQILTMQ
QSTPTSPAKAGVSLSAQNVKPVQTVSMGGVPPQFKTIVPLATPPNVQQIQVPGSRFHYVR
LVTASSGSHTVTGSSPSSVAGTIQPAKPMVVNSAAVRMSVPIVSAQTVKQVVPKPLTSAS
PQVVTSQQQRLIMPATPLQQIQPLPPGTLLAPAHGQGNMGYAVLSAPYVTQLQQSTIVTL
ASNSGFSTPSSVQTQARLPLNGLSASDSTSRPRKPCNCTKSQCLKLYCDCFANGEFCSNC
NCTNCFNNLEHESERLKAIKACLDRNPEAFKPKIGKGKEGESDRRHSKGCNCKRSGCLKN
YCECYEAKIMCSSICKCVGCKNFEESPERKTLMHLADAAEVRVQQQTAAKTKLSSQISDL
LTRTTPTISSGGGKLPYTFVTKEVAEATCDCLMETAEQAELSNQSQAMAERVILEEFGRC
LKRIINYAGKAKTDCC
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggtgccccctgagctaaacagcctgctcccggacgagatcatggacactgag
gccatcgtcactgatgatgacctccctgctgtctgccctgctccgcccaaccccctggag
acacaggacgctcccgttcccatggagacagaggtgccggagatagtgactctgtgcaca
gcggcaccttctatacccgtgcagagaactcaggccttgaccaccctcactagcacggac
tcgaccccctccagtgggactgggagcacgggcacccagctcctcctcactccctccagc
tccaccatgactctccagcccacctccctcacgctcaccgcccccaaacccagcagcccg
caggtcacagggagcctgcagaagctctccactcctctcgccctccctgccaaccaccag
ctcatcctcaacaaggtggcgtcctccccaggctcggaggccaagccaacaatgctcaag
cctgacggccagaaactggtactcactgcgctcggaaaggctggccagcccattgttttg
gcactgccgcccggggctggcaaagctggcaccatgttgagcccaggggacggcaaaggg
cagccaccacagttcaaggtggtgaccattgggggccgcaccgacctgaaaccaatcggg
gtccaagcggtgagcactgccagtcagctgataggcacgtcacagacagcccagcagggt
cagcagctcaagacgctacagatcaccaagaaaatcccagtctccactgctgccccagta
atcacaaaatacatcatcacaaaggctcttaacagcaaaggcttgaccagccaaacgtct
gtgtcgcctgtggttacagggcgggttctgacccagagcaccccaggaacgccccctcgg
accatcacagttgcggatgcgctcagcaccagtggaggtagtaaggtggccatctccccc
ctcaagtctccaagcaagttgaccgtggtgtccgtggcctctccatcgcccacttcccct
cagaagtccgtggccgttcccctgagcgtggcgctaggtcaacagattctcacaatgcag
cagtccacccccacgtcacctgccaaagctggggtcagcctctccgcacagaacgtgaag
cctgtccagacggtctccatggggggagtgccgccccagttcaagaccatcgtccccctg
gccacccctcccaacgtgcagcagatccaggtccccgggagccgcttccattacgtgcgg
ctggtgacggcgtcaagcgggagccacacggtcactggtagcagccccagcagcgtggct
ggcaccatacagccagccaagcccatggtggtcaactctgcggcggtccggatgtctgtt
cccatcgtttcagctcaaactgtaaagcaggtcgtgcccaaacctctgacgtcagcaagc
ccccaggtggtgaccagccaacagcagcgcctgatcatgccagccacgcccctccagcag
attcagcctctgccccccggaactttacttgccccagcccatggtcaggggaacatgggc
tacgccgttctctccgcgccatatgtcacacagcttcagcagtcaacaatagtgacactg
gccagcaactctggattttccacaccatccagtgtacaaacacaagccagattgcctctt
aatggtctttcagcttcagattctacatcaagaccaaggaagccatgcaattgtacaaaa
tcacaatgtctgaaactttattgtgattgctttgccaacggggagttttgcagcaactgt
aattgcaccaactgctttaataacctggagcatgagtccgagcgattaaaagccatcaag
gcgtgtttggaccggaacccagaagcctttaagcccaaaattggcaaaggcaaagagggc
gagtcggaccgcaggcacagcaagggctgcaactgcaagcgctcgggctgtctgaagaac
tactgcgagtgttacgaggccaagatcatgtgctcatccatctgtaagtgtgtgggctgc
aaaaactttgaggagagccctgagcggaagactttgatgcacctggcagacgcagcggag
gttcgggtgcagcagcagacagcggccaagaccaagctctcgtcacagatctcagacctg
ctaacccgcaccactccaaccatatccagcggaggggggaagcttccctacacgtttgtc
actaaggaagttgcagaagcaacgtgcgactgtctgatggagacggccgagcaggcagaa
ctgtccaatcagtcgcaggctatggccgagcgggtcatcctggaggagtttggccgctgt
ctcaagagaatcattaactatgccggcaaagccaagacggactgctgttag
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