Alosa sapidissima (American shad): 121698855
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Entry
121698855 CDS
T11137
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
asad00535
]
121698855 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
asad00537
]
121698855 (gpc6a)
Proteoglycans [BR:
asad00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
121698855 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
asad00537
]
Others
121698855 (gpc6a)
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
121698855
NCBI-ProteinID:
XP_041937247
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Position
23:complement(6856580..6979408)
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AA seq
572 aa
AA seq
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MDLPHRCAMFRLQIVFCTLSVLLSLSFGGDVKSRSCNDVRQAYTAKGFSLASVPHQEISG
EHLRVCSQGYTCCTSEMEDSLGQQSKLEFENLVEEMSQNLRTTFTSRHKKFDEFFLELLE
NSQRSLNDMFVRTYGKLYMQNSEVFQELFTELKRYYTGGNVNLQEMLNDFWSRLLERMFQ
LLNSQYHFTDDYLECISKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLMVGREVANR
VAKVNVSPGCSKALTRMLYCPYCGGLPDLKPCGNYCQNVIKGCLANQADLDPEWNLFIDA
MLLVADRLEGPFNIEAVMEPIDVKISEAIMTMQDNTMQVSAKVFQGCGHPKPAGMGRSTR
GITDTFNARFRPYSPEERPTTAAGTSLDRLRIVWRTMQQSVVDIKEKLKESKRFWSGLPN
SICSEGRVVSSDSEQCWNSHTKGRYFPEVVKDGLTNQLHNPEVEVDITRPDTFIRQQIMT
LRMMTTKLRNAYNGNDIYFQDSSDEGSGSGSGSGCTEGCTTEFEFTGTEAPVVSADRSDG
QAASGHATSCVAASSVLLTSLALQLVLLWQWR
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggatttaccacataggtgtgcgatgttcagactacagattgtcttttgcactttgtcg
gtgctactgtcactttcatttggtggagatgttaaatcgcggagctgcaatgatgttcgg
caagcctacaccgccaaaggctttagtctcgccagtgttcctcaccaggaaatatcaggt
gaacatctgcgcgtgtgttcccaaggttacacctgctgtacgtcagaaatggaggactca
ctcggccagcagagcaagctggagtttgagaacctagtggaggagatgagccagaacttg
cgaaccacattcaccagtcggcataaaaagtttgacgaattcttcttggagttgctggaa
aactcacagaggtcgctgaatgacatgttcgtgcggacatacggcaagttgtacatgcag
aactcggaggtctttcaggagctgttcacggagctcaagcgctactacacgggcggcaac
gtcaacctccaggagatgctcaacgacttctggtcgcggttgctcgagcgcatgttccag
ctgctcaactcgcagtaccacttcaccgacgactacctggaatgcatcagcaagtacact
gaccagctcaagccgtttggcgacgtgccccgcaagctgaaggcccaggtcacgagggcc
ttcatcgcagcccggacgtttgttcaggggctcatggttggcagagaggtggcaaacaga
gtggcaaaggtgaatgtgtcgccaggctgctctaaggcgctcacacggatgctgtactgc
ccatactgcggaggactgcccgaccttaagccctgcggcaactactgccagaacgtcatc
aagggctgcctggccaatcaggccgacttggacccagagtggaacttattcattgatgcc
atgctgttggtggcagacagattggaaggaccgttcaacatagaggccgtcatggagccc
atagatgtcaagatctccgaggccatcatgaccatgcaggataacaccatgcaagtttca
gcaaaggtctttcagggatgtgggcatcccaagcctgccggaatggggcggtccacccgc
ggcatcacagacactttcaacgcccgcttcagaccctacagccccgaggagcggcccacc
acagccgctggcaccagcctagaccgcctgaggattgtctggaggacaatgcaacaaagc
gtggtggatatcaaggagaaattgaaagagtccaagaggttctggtctggcttgccgaac
agcatctgctcagaagggagggtagtgagctctgactcagagcagtgctggaacagtcac
accaagggcaggtacttccctgaagtagtgaaggacggtttgacaaatcagctgcacaat
cccgaggtggaggtggacatcactcgacctgacaccttcatccgccagcagatcatgacg
ctccgcatgatgaccacgaagttacggaacgcatacaacggcaacgacatctactttcaa
gattccagtgacgagggcagtggctcgggcagcgggagcggctgtacggaaggctgcacc
acagagttcgagttcaccgggaccgaggcccctgtggtaagcgctgaccgcagcgatggt
caggccgcctctggccacgccacgtcctgtgtggccgcctcgtctgtcctcctcacgtca
ctggcactgcagctggtcctgctctggcagtggagataa
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