Alosa sapidissima (American shad): 121698980 Help Entry 121698980         CDS       T11137                                  Symbol pcdh17 Name (RefSeq) protocadherin-17 isoform X1   KO K16499   protocadherin delta 2 Organism asad  Alosa sapidissima (American shad) Brite KEGG Orthology (KO) [BR:asad00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:asad04515]     121698980 (pcdh17) Cell adhesion molecules [BR:asad04515]  Cadherins   Protocadherins    121698980 (pcdh17) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_2 Cadherin_CELSR2_9th PepSY Cadherin_C_2 Motif Other DBs NCBI-GeneID:  121698980 NCBI-ProteinID:  XP_041937476 LinkDB All DBs Position 23:complement(3024053..3092344) Genome browser AA seq 1148 aa AA seqDB search MYLSILFFLCLWAQALTLKNLNYSVPEEQKQNTIIGNLAKDANIEINVTGQKSNFRVLEN SARHLVDVDPTSGLLRTKQRIDRDTLCQRNPKCQLSMEVFANDAEIFMIKIEIQDINDNS PSFPNDVIDLEIAENAAPGTRFPLTAAHDLDSGENGLKTYQITRDDYSIFSLDVKSRGDG TKFPELVIQRPLDREERSHHTLILTAIDGGEYPRSGTMQINVKVIDSNDNSPVFEQPSYV VEVPENTPTGRVLIDLNATDPDEGSNGQIVYSFSGYTPDRIRELFSIDPETGVIKIQGKI DYEENPIIEIDVQAKDQGPNPIPGHCKVTVKVSDRNDNWPSINFVSVRQGAISEAAPPGT VIALVRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFFTVVTDKPLDRELQDEYNITILA KDNGNPPLNSTKSFTVKILDENDNAPHFTKPVYVMQISENNVPGEYMGSVLAIDPDLGMN GTVSYVLLPSNVSSDSIQTFVGVTASTGAIYALRAFNYEQTKYFDFKVLAKDSGSPHLQS NATVRVNILDVNDNVPVIVLPLLQNDTAEIHVPRNVGIGHIVTTVRAVDNDSGESGRLTY EITEGNEEHLFEIDPTTGEVRTAHPLWEEVAPVVELVIRVSDHGKPSLADNAKLIIKAYS GTLPEGEPRINAERHGWDMSLPLIVTLSIISIMLLAAMVTIVVKCKRENKEIRTYNCRIA EYSHPQLGKSKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTRLPLS SPRSEVMYLKPAANNLPVPQGPVGCHTSFTGPVTSTTETPTNRMSIIQTDNFPAEPNYMG SRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKLKAAGPKT QLLEQATEEECVNCTEECRVLGHSDRCWMPQFPAGSQAEGSDYRTNVFVPAGMESVAVET ETYETINPNGKKTFCTFGKERRDHTILVANVKPYLKAKRALSPLLQEVPSASCSPTKGCC VSTSSPLSSSSSSVTCKAPGDGAEGLPSTSHHHHHHQQLGPEGQYLSPSKHGREHQGAST DPVAKVLAEARSRISQEVGMEEGMAGVVSVGVGGERGGRDGMDADQVVRDIDKLLQDCRT NESTPVRK NT seq 3447 nt NT seq  +upstreamnt  +downstreamnt atgtatctttctattttgtttttcctctgtttatgggctcaagccctaactctgaaaaac ttgaactattctgttcccgaggagcaaaaacagaacactataatcggtaatctcgccaaa gatgctaacattgaaataaatgtaacgggccagaaatccaacttcagggtgttggagaat tctgcccggcatctcgtagacgtggaccccacgagcggactgctcaggactaagcagagg attgacagggacacgttgtgccaacgaaaccccaagtgccagctctccatggaggtattt gccaacgacgcagaaatattcatgattaaaatcgaaatacaggacataaacgataattcc ccctcctttcccaacgacgtgattgatcttgagatcgctgagaatgcggctccaggcact cgcttccccctgaccgccgcgcatgacctggactccggggagaacgggctgaaaacctat cagatcacacgagatgattacagcatcttttctttggatgtaaaatcaagaggagacgga actaaattcccagagctggtgattcagaggccgttagaccgggaggaacgtagccatcac acactgatcctaacagccattgacggaggggaatatccccgatctggtaccatgcagatt aatgtaaaagttattgattctaatgataacagcccggtgtttgagcagccctcctatgtg gttgaggttcctgagaacaccccaaccggaagagtattgatagatttaaatgccacagat cccgatgaaggcagtaacgggcagattgtttattcatttagtggctacacgccagaccgg atcagggaactgttctctatagaccctgaaacaggtgtcataaagattcaggggaaaatc gactatgaggaaaacccaattatagagattgatgtccaggcaaaggaccaagggcccaat cccattcctggccattgtaaagtcactgttaaagtgtcggacaggaatgacaactggccg tccatcaactttgtgtctgtgcgacagggggccatcagcgaagcggcccccccagggacg gtcatcgctctggtgcgagtcacagacaaagactcgggccggaacggtcagctccagtgc cgcgtgctggggaacgtgccgttcaagctagaggagaactacgacaacttcttcaccgtg gtgacggacaagccgctggaccgggagctgcaggacgagtacaacatcaccatcctggcc aaggacaacggcaacccgccactcaactccaccaagtccttcaccgttaagatcctggac gagaacgacaatgcgccgcacttcaccaagcctgtatatgtcatgcagatttctgagaac aacgtgcccggtgagtacatgggctcagttctggccattgaccctgacctgggcatgaac ggaaccgtgtcctacgtactgctgccctctaacgtcagcagcgactccatccagacattt gtgggggtcacggcctccacaggtgccatctatgccctgcgggcctttaactacgagcag accaagtactttgacttcaaggtgctggcgaaggactcgggctcaccccacttgcagagc aacgccacggtgcgcgtcaacatcctggacgtcaacgacaacgtgcccgtgatcgttttg ccgctgctgcagaatgacacggcggagatccacgtcccgcgcaacgtgggcatcgggcac atcgtgacgacggtgcgcgccgtggacaacgactctggcgagagcgggcgactcacctac gagatcaccgagggcaacgaggagcacctgttcgagatcgacccgaccaccggtgaggtc cgcaccgcgcacccgctctgggaggaggtggcgccggtcgtggagctcgtcatccgcgtt tcggaccacggcaagccgtcgctcgccgacaacgccaagctcatcatcaaggcctactcg ggcaccctccccgagggcgagccgcgcatcaacgccgagcggcacggctgggacatgtcg ctgccgctcatcgtgacgctcagcatcatctccatcatgctgctggccgccatggtcacc atcgtggtcaagtgcaagcgggagaacaaggagatccgcacgtacaactgccgcatcgcc gagtactcgcacccgcagctgggcaagagcaagaagaagaagatcaacaagaacgacatc atgctcgtgcagagtgaggtggaggagcgcgacgccatgaacgtcatgaacgtggtgagc agcccgtcgctcgccacctctcccatgtatttcgattaccagacgcgcctgcccctcagc tcgccgcgctccgaggtcatgtacctcaagccggccgccaacaacctgcccgtgccgcaa gggcccgtcggctgccacaccagcttcacggggcccgtcaccagcaccaccgaaaccccc actaacaggatgtccatcattcagacagacaatttccccgctgagcccaattacatgggg agcaggcaacagtttgttcaaagcagctcaacatttaaggaccccgagcgggccagcctc cgtgacagtggccacggtgacagcgaccaggccgacagtgaccaggacaccaataaaggc tcctgctgcgacatgtcggccaaggaggcgctcaaactgaaagctgctggacccaaaaca cagctactggagcaagctactgaggaagagtgtgtgaactgcacagaagagtgccgtgtg ctgggccactcggaccgctgttggatgccccagttcccagcgggctcccaggccgagggc tccgactaccgcaccaacgtcttcgtccccgccgggatggagtctgtcgccgtggagacg gagacctacgagaccatcaaccccaacggcaagaagaccttctgcacgtttggcaaggag cggcgcgaccacaccatcctggtggccaacgtcaagccctacctgaaggccaagcgcgcg ctcagccctctcctccaggaggtgccctcggcctcctgcagtcccaccaagggctgctgc gtgtccacctcctccccgctgtcctcctccagctcctcagtgacctgcaaggccccaggg gacggcgccgagggcctgcccagcaccagccaccaccaccaccaccaccagcagctgggc cccgagggccagtacctgtcgcccagcaagcacggccgcgagcaccagggggccagcact gacccagtggccaaggtgctggccgaggcacgctcccggataagccaggaggtgggcatg gaggaaggcatggctggggtggtcagtgtgggggtcgggggcgagaggggtggccgggat ggcatggacgccgaccaggtggtgcgcgacatcgacaaactgctgcaggactgtcgcacc aacgagagcacccctgtcaggaagtga

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