Alosa sapidissima (American shad): 121699069
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Entry
121699069 CDS
T11137
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
asad03036
]
121699069
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121699069
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121699069
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
121699069
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
Sec7-like_HUS
HEAT_DAAF5
ParcG
MMS19_C
MMS19_N
TAN
Paxt-1_C
Motif
Other DBs
NCBI-GeneID:
121699069
NCBI-ProteinID:
XP_041937615
LinkDB
All DBs
Position
23:complement(9075944..9144592)
Genome browser
AA seq
1629 aa
AA seq
DB search
MENMEQCVSQVMQKDLGRRLQVGQDIIDYILDKQRSHDLEQDQTLLDRMADNIASSWVNS
SNFKVALLGMDLLSALVTRLQDRFRPQIGTVLPSLIDRLGDAKDQVRDQDQTLLLKIMEQ
AATPQYVWDRMLGGFKHKNNRTREGVCLCLISTLNLYGAQGLTLSKIVPHICNLLGDPTS
QVRDGAMNCLVEIYRHVGERVRMDLGKKGLPQSRLNVIFSKFDEVQRSGNMILSSDKNID
DDDSVDGGRSSSSKGASSVRRPGNTGSMRRPSSASSSKSTGKEGGSAGAVDEEDFVRAFE
DVPTVQIYSSRELEDSMNKIREVLSDERQDWEHRVTALKKVRSLLLAGAVEYEGLSQHLR
QMEPAFKLSAKDLRSQVVREACITLGHLSVLLGNRFDHGAESIMPTLLNLVPNSAKIIAT
SGMAAVRIILRHTHYPRLIPIITSSCISKSVAIRRRCYEFLDLILQEWHTNALDRHVAVL
SETVKKGVHDADSEARSVARKCYWGFHGHFSREAEQLFQALELSYQKALQSHLKGSDSVM
SLPQSDRSSSSSQESLNRPLSKSSLGVGAGRTVKAVPSRATPGSSSLQRSRSDIDVNAAA
SAKSRMPSVPSAAPFSSANALPPGSYASLDGGTPGKVEGRVRTRRPSAGSTAGSVTPATD
SRGRSRAKVVSQSQRSRSANPTGSAGSRSSSPGKLLGHTYGRIPRPTGTATPSDGRRSRI
PRSQGCSRETSPTRSSSVRVSRIPRPSASQGCSRDTSRESSRDTSPARGFTPLVSRRHSR
STSALTAADPLGYSDRFGLAHQARISASVNAMRILNTGTDVEAAVADALLLGDSRNKRRP
MRRRYESPGIYSDDDANSDASSACSERSYGSRNGGMPHYMRQTEDVAEVLNHCASSNWSE
RKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFITLHRED
LQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPYDQQFNILMRFIVDQTQTPN
LKVKVAILKYIDLLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKTLQSWAGDDW
AGRPGSLLSLPTESNMEERCKQAAQMVLISLFELNTPEFTMLLGALPKTFQDGATKLLHN
HLKNSSNAAAVGSPSNTVGRTPAPRHPSSRTSPLTSPTNCSHGGLSPSRLWGGSWSTNGL
SKHPPPFPPPSSSSSSSTPAAPSTRGPPRRAFSPSMMEYDTENMNSDEIYSSLRGVTEAI
QNFSFRSQEDVLEPVRRDGKRDDPAGGMASSGAEQRVGMDVVESGGGRTALDNKTSLLNT
PSPRSFSGPRGRDYNPYNYTDTISGYDRSALKEAVFDDDAEHFRDGRRQQEGGENKIMHP
KAFPTGAGQQLELVGDLLKELSSSMGDRVEERRTALLELLKVTREDCLAVWDEHFKTMLL
LLLETLGDKDHTIRALALRVLREVLRNQPARFKNYAELTIMKTLEAHKDSHKEVVRAAEE
AASTLASSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIERIAKDSLITLLPDIIPGL
LQSYDNTESSVRKASVFCLVAIYSVIGEDLKPHLAQLTGSKMKLLNLYIKRAQTTNSNSS
SSSDVSSHS
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggagaatatggagcaatgcgtttcccaggtgatgcagaaggacctaggccggcgatta
caagtcggtcaggatattatagactacatcttggacaagcagagatcccacgacttggaa
caggatcagactctgcttgacagaatggcggacaacattgcctcgtcatgggtcaattcc
agtaattttaaggttgcattgctgggaatggacctgttgtcagccttagttaccaggttg
caggatcggttccgtccccagataggaacagtcctgcccagtctgatagaccgcttgggg
gacgccaaggaccaggtgagggaccaggaccaaaccctgctgctgaagatcatggagcaa
gcggccactccccagtacgtgtgggatcgaatgttgggcggattcaaacacaaaaacaac
cggaccagagaaggagtctgcctctgccttatctccacccttaatttatatggagcccaa
ggactcaccctcagcaaaattgtacctcacatatgtaacctgttaggagacccaacaagc
caggttcgtgacggagccatgaactgcttggtggagatctacagacacgtgggggagagg
gtccgcatggacctgggaaagaaaggccttccccagtcccgcttgaatgtaatttttagc
aaatttgacgaagtccaaagatcgggaaacatgattctctcctctgataagaacatcgac
gatgacgactctgtggacgggggccgttcctcgtcctctaagggggcgtcgtctgtgcga
cggccaggaaacaccggctccatgcgccggcctagctccgcctccagctccaaatccaca
ggtaaagagggtggcagcgctggggccgtggatgaggaggacttcgtccgtgcctttgag
gacgtgcccacagtacagatctactcgagccgtgagctggaggactccatgaacaagatc
agagaggtcctgtcagacgagcgtcaagactgggagcacagggtcaccgcgctgaagaag
gtacgctcattgctgctggccggcgctgtggaatatgagggtctctctcagcatttgcgt
cagatggagccggccttcaagctctcggccaaagacctgcgctcacaggtggtccgagag
gcctgcatcacgcttgggcacctgtccgtgttgctgggtaaccgctttgaccacggcgcg
gagtccatcatgcccacgctgctcaacctggtacctaacagcgccaagatcattgccacg
tccggcatggctgccgtccgcatcatcctgcgtcacacccactaccctcgcctcatcccc
atcatcaccagcagctgcatctccaaatctgtggccatccgacggcgctgttatgagttc
ctggacctgatcttacaggagtggcatacaaacgctcttgacaggcatgttgcagtgctc
agtgagaccgtcaagaaaggagtccatgacgcagactcggaggccagatctgtggccaga
aagtgctattggggtttccatggccacttcagccgggaggcggagcaactgtttcaggct
ctggagctgtcctatcagaaggctcttcagtcccacctaaagggctctgacagcgtcatg
tccctcccccaatcagatcgctcctcttccagttcccaggagagcctcaatcggccgctt
tcgaagagcagccttggagttggcgcaggcagaactgtgaaggcggttccttcgcgagcg
actccaggctcctcctccctgcaacgttcccgtagcgacatcgatgtgaatgccgcagcc
agtgccaagtctcgcatgccctcagtgcccagtgctgcccccttcagttctgccaacgca
ctgccccccggctcctacgcctccctagatggcggtacccctggtaaagtggagggtcgt
gtacgtaccaggagaccaagtgctggcagcacagcaggaagtgtcaccccagccacagac
agcagggggcgcagtcgagctaaagtggtgtctcagtctcagcgatccagatctgctaac
cccacaggcagtgcgggcagtcgttccagctcccccggtaagctgctcggtcacacatac
gggcgtatccctcgtcccacgggaaccgcaacgccgtcggacggcaggcgcagccgcatc
ccccgcagccagggctgcagccgcgagaccagccccacacgctccagctcggtgcgggtg
agtcgtatcccgcggcccagtgcgagtcagggctgcagtcgtgacacgagtcgcgagagc
agccgtgacaccagccccgcccgtggcttcaccccgctggtgtcacggcgtcactcccgc
tccacgagcgcgctcacagcggccgacccactcggctactcagaccgctttggcctggcc
caccaggctcggatctcggcctccgttaacgccatgcgcatcctcaacacaggcactgat
gtggaggcggctgtggcagacgctctgcttttaggcgactccaggaataagcggaggccg
atgcggcgtcggtacgagtcgccggggatctactccgacgacgacgccaacagcgacgcg
tcgagcgcttgctcggagcgttcgtacggctcacggaacggcggcatgccgcactacatg
cgccagacggaggacgtggccgaggtgctgaaccactgcgccagctccaactggtcggag
aggaaggagggcctgctgggcctgcagaacctgctcaagagccagcgcatcctcagccgt
gtagagctgaagcggctctgtgagattttcaccagaatgtttgcagacccacacagcaag
agagtgtttagcatgttcctggagacactggtggacttcatcacgctgcaccgtgaggac
ctgcaggactggctcttcgtcctgctcacccagctgctgaagaagatgggcgccgacctg
ctgggctccgtccaggccaaggtccagaaggcccttgacgtcaccagggattcctttccg
tacgatcagcagttcaacatcctgatgcggtttatcgtcgaccagactcaaacacccaac
ctcaaggtgaaggtggccatcttgaagtacatcgacttgctcgcccgccagatggacccc
acggacttcgtgaactccagcgagacgcggctggcggtctcgcgcatcatcacgtggacc
accgaacccaaaagctccgacgtccgcaagaccctgcagagctgggcaggggatgactgg
gctggcaggcctggctctctgctttccctgcccacggagagtaacatggaggagaggtgc
aagcaggcggctcagatggtcctgatctctctgtttgagctgaacaccccggagttcacc
atgctgctgggagctctgcccaagacctttcaagacggagccaccaagctcctacacaac
cacctcaagaactccagcaacgctgccgctgtgggttctcccagtaacacagttggccgg
acccctgctcctcgccaccccagcagccgcaccagccccctcacctcccccaccaactgc
tcccatggggggctctcgcccagtcggctttgggggggcagctggagcactaacggcctt
tctaagcacccccctcccttccctccaccctcctcctcctcctcctcctccacccctgcc
gctccctccactaggggtcctccccgccgcgctttctcccccagcatgatggagtacgac
acagagaacatgaactcggatgagatctacagctcgctgcgcggcgtgaccgaggccatc
cagaacttcagcttccgcagccaggaggacgtgctggagcccgtcagaagggacggcaag
cgagacgacccggctggcggtatggcgtcgtcgggggcggagcagcgggttggcatggac
gtggtggagagcggtggcggtcggacggcgctggacaacaagacgtctctgttgaacacg
ccgtcgccgcgctccttcagtggcccgcgcgggcgcgactacaacccctacaactacacg
gacaccatcagcggctacgaccgcagcgccctcaaggaggccgtgttcgacgacgacgcc
gagcacttcagagatggtcgtcgacagcaggaaggtggtgaaaataagatcatgcacccc
aaagccttcccaacaggtgcagggcagcagctggagctggtgggggacctgctgaaggag
ctgtccagctccatgggtgaccgggtggaggagcggcggacggcgctgctggagctgctc
aaggtcacgcgggaggactgcctggccgtctgggacgagcacttcaagaccatgctgctg
ctgctgctcgagacactcggggacaaggaccacaccattcgcgccctagcgctccgggtt
ctgagagaggtcttgcggaaccagcctgcccgcttcaagaactatgcagaactcaccatc
atgaagaccctggaggcccacaaggactcccataaagaggtggtgcgtgcggcggaggag
gccgcctccaccctggccagctccatccacccagagcagtgcatcaaggtgctgtgcccc
atcgtgcagacggccgactaccccatcaacctggccgccatcaagatgcagaccaaagtc
atcgagcgcatcgccaaggattcgctcatcacactgctgcccgacatcatcccaggcctg
ctgcagagctatgataacactgagagtagtgtgcgcaaggcgagtgtgttctgcctggtg
gccatctactctgtgatcggagaggatctcaagcctcacctggcccagctcacgggtagc
aagatgaagctgctgaacctgtacatcaagagggcccagaccaccaacagcaacagcagc
agctcctcagacgtctcttctcacagctaa
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integrated database retrieval system
