Alosa sapidissima (American shad): 121699665
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Entry
121699665 CDS
T11137
Symbol
smad1
Name
(RefSeq) mothers against decapentaplegic homolog 1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04081
Hormone signaling
asad04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121699665 (smad1)
09133 Signaling molecules and interaction
04081 Hormone signaling
121699665 (smad1)
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
DUF4223
Motif
Other DBs
NCBI-GeneID:
121699665
NCBI-ProteinID:
XP_041937956
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Position
1:complement(7762932..7784391)
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AA seq
476 aa
AA seq
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MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELERALSCPGQ
PSSCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALECCEYPFGSKQKDV
CINPYHYKRVDSPVLPPVLVPRTSEFNAKLSMLPRFRNPLHQAEPHMPQNATFPDSFPQQ
PPQPPAGSLPFAPHSPTNSYPNSPGSNAGSSATFPQSPSSSDPGSPFQMPETPPPAYMPP
DEPMTQDCPQPMDTNLLAPTLALENSNRPDVQPVAYEEPKHWCSIVYYELNNRVGEAFQA
SSTSVLVDGFTDPSNNRSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLS
DSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAELLAQSVNHGFEAVYELTKM
CTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcacatcgctgttctctttcacgagcccggccgtgaagcggcttctgggctgg
aagcagggtgacgaggaggagaagtgggcggagaaggcggtggacgcgctggtcaagaag
ctgaagaaaaagaagggtgccatggaggagctggagagagccctcagctgcccaggccaa
cccagcagctgcgtcaccattccacgctcgctggacggacgcctccaggtgtcccaccgt
aagggtctgccacatgtcatctactgccgcgtgtggcgctggcccgacctgcagtctcac
catgagctaaaggccctagagtgctgcgagtaccctttcggctccaagcagaaggacgtc
tgtatcaatccctatcactacaagagagtggacagtccagtgctgcctcctgtgttggta
ccacgcaccagtgagttcaacgcgaagctgagtatgctgcctcgcttccggaaccctctg
caccaggctgagcctcacatgcctcagaacgctaccttccctgactccttcccgcagcag
ccacctcagccaccagccggcagcctgcccttcgctccacactcgcccactaacagctac
ccaaactccccaggcagcaacgcaggcagcagtgccactttcccacagtcaccctccagc
tctgaccccggcagccccttccagatgccagaaacccctccacctgcctacatgccccca
gatgaaccaatgacccaagactgtcctcaaccaatggacaccaatctgctggctcccact
ctggctcttgagaacagcaaccgcccagatgtgcagccagtggcttatgaggagccgaag
cattggtgcagtattgtttactatgagctaaataaccgtgttggcgaggccttccaggca
tcttctactagcgtactggtggatggcttcactgacccctccaacaatcgcagccgcttc
tgcctgggcttgctctcaaatgtaaatcgcaactccaccatcgagaacactcgacgccat
attggcaaaggcgtgcatctgtattatgtgggtggagaggtatacgctgagtgtttgagt
gacagcagcatctttgtgcagagccgtaactgtaactaccaccatggcttccatcctact
acggtctgcaagatccctagtggctgcagcctcaagatcttcaacaaccaggagtttgcg
gagctactggcccaatctgtcaaccacggctttgaggctgtttacgagcttaccaaaatg
tgcaccatccgcatgagttttgtaaagggctggggtgcagagtaccaccggcaggatgtc
actagcaccccctgctggattgagatccacctgcatggcccactgcagtggctggataag
gtcctgacccagatgggctctcctcacaacccaatttcttcggtgtcctaa
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