Alosa sapidissima (American shad): 121699741
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Entry
121699741 CDS
T11137
Symbol
arhgap17a
Name
(RefSeq) rho GTPase-activating protein 17a isoform X1
KO
K20638
Rho GTPase-activating protein 17
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121699741 (arhgap17a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121699741 (arhgap17a)
Membrane trafficking [BR:
asad04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121699741 (arhgap17a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR
RhoGAP
BAR_3
FliJ
ATG14
VMAP-M1
Motif
Other DBs
NCBI-GeneID:
121699741
NCBI-ProteinID:
XP_041938040
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Position
24:7980104..8005861
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AA seq
873 aa
AA seq
DB search
MKKQFNRMKQLANQTVGRAEKTEVLSDDLLQIERRMEMVRVVSHNMHKRMVSCLQGHIGT
DGEKRHGHWKWASMASWPDGPAEQIPNLPKKKLPLFALSQSMQDGGGQLGEESLIGKMME
VCGDAENRLASELMQHEVQIEKDILDPLSQLAEVDIPNILKQRKQLAKLVLDYDSAKARW
LQATKSIISGTNTQALTAKADSLKEEVDEAMNKVEQCKDQLAADMYNFSSKEGDYARYYV
LLLEAQADYHRRSLTVLESVLPTIQAQQDSWTEKPAFGTGLDEHLKRSNREIALPMEACV
MMLLETGMKEEGLFRIAAGASKLKKLKAALDCSTSQLEEFYSDPHAVAGALKSYLRELPE
PLMTYQLYDEWIQASNVSDPDKRLQALWVVCDQLPKNNKANFRYLVKFLAKLAQDSEINK
MTPSNIAIVLGPNLLWAKTEGSLAEMAAATSVHVVTIIEPIIQHADWFFPDEVDFNVSGM
FTMPTPITNHVNHLTTPDYDCGTIERKRPSSMVGPDSDIPRRDSAANKLLDHIPRRGNTL
TRKQHASPAFQPPLPPVEVAGAAVGQPAAELQPQLPVPGGQGLEACQPSLALGIAALAAA
QQLLVQPCEESSSKSRESASTPPPQRNGSAGSGQLNVGAPVAGTTGPSPHLTRRGTKKPA
PAPPKPAIPPPGQPGPQPGQHPAPGTPQSLPHTGRPLSSHSPTAQTSTLAVTQAGTTPRR
HSGNQPPIQAPNHPPPQPPTTQGTPPPQGLTEPGADPSPPSTPTPPNTPPPITTPQDGAG
TPIFSPYPTGSLPRQRPVPRPRNRPSVPPPPQPPTSGAGTDTNGICGSAYKMMDSGMAFK
GLSRVYIPDLSGEQQPPGCQPKDGELDSESTVL
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacagttcaatcggatgaaacaactggccaaccaaacagttggaagggctgag
aaaacagaagttctaagtgatgaccttttacagatcgagcgacgtatggaaatggtgcgt
gtggtgtcccacaacatgcacaagaggatggtctcgtgtttacaggggcacatcggcact
gacggcgaaaagagacatggacattggaaatgggcttcaatggcctcttggccagacgga
cctgcagagcaaatcccaaatttgccgaagaaaaagctcccattattcgccctctcacag
tccatgcaggatgggggtgggcagctgggggaggagtcactcatagggaaaatgatggag
gtctgtggggatgctgagaaccggttagcctcagagctaatgcagcatgaggtgcaaatt
gagaaggatattttagaccctctcagtcagttagcagaggtggacattcccaacatcctg
aagcagaggaagcagttggccaagctggtattggactacgactcagcaaaagcaaggtgg
ttgcaggcaaccaagtcaataatctcaggaacaaacactcaagcgcttacagccaaggct
gattcactcaaagaagaggtggatgaagctatgaacaaagttgagcagtgcaaggaccaa
cttgctgcagatatgtacaacttctcttcaaaggagggagattatgcgcgatattatgtg
ttgctattagaagcacaagcagattaccaccgcagatcacttaccgtgcttgagagtgtt
ctgcctaccatccaagcacagcaagactcctggactgagaagccagcctttggaacgggc
ttagatgagcacttaaagaggagtaaccgagaaatcgccctacccatggaggcttgtgtg
atgatgctgctggagacgggcatgaaggaggagggcctcttccggattgctgctggggct
tcgaagctgaagaagttgaaggctgctctggactgttccacatctcagctggaggagttc
tactccgatccccacgctgttgctggtgctttgaagtcctacctgagagaactgccagag
ccactaatgacctatcagctgtatgatgagtggatccaagcatccaatgtgtctgatcct
gacaaaagactgcaagcactatgggtggtgtgtgatcaattaccaaagaacaacaaagct
aactttaggtacctggtaaagtttctcgcgaagctggctcaagacagtgagatcaacaag
atgacccctagcaacatagctattgtcctgggacccaatttactgtgggccaaaactgaa
gggagtctggcagaaatggctgcagcgacttcagtccatgtggtgaccatcattgaaccc
atcattcagcatgcagactggttcttccctgatgaggtggacttcaatgtatcagggatg
tttactatgccaacaccgattacaaaccacgtcaaccacctgaccactccagactacgac
tgtggcaccatagaaaggaaaaggccgagtagtatggtgggaccagattcagatattcct
cgcagagacagtgccgctaacaaattactggaccacattccgcgtagaggcaatactcta
actagaaagcagcacgcttcgcctgccttccagccccctctgcctccagtggaggtggcg
ggggctgcggtggggcagcctgccgccgagctccaaccccaactgcctgtgccggggggg
cagggcttggaggcctgccagcctagcttggcgctggggatagctgccctggcggccgcg
cagcagcttctagtccagccctgtgaagagagcagctccaagtctagggagtctgcgtcc
acacccccaccccagaggaacggctctgcaggatcaggccagctgaacgtgggggcccct
gtggcgggaaccacaggccccagtcctcatttgacacgcagaggcaccaaaaagccagcc
cctgcccctccgaaaccagccatcccccctccaggtcaaccgggccctcagccaggccag
catcccgccccaggcacccctcagtccctcccccacacaggaagacctctctccagccac
tctcccacagcgcagacctccactctagcggtcacccaagctggcacgacacctcgccgt
cactccggcaaccagccacccatccaggcgcccaaccacccacctccacaaccacccacc
acgcagggcactcctccgcctcagggcctgacagagcctggggcagacccctccccgccc
agcactccaaccccacccaacacacctccaccgatcacaactccccaggatggtgccgga
acccccatcttttcaccgtacccaacaggttctctgccccggcagcggcctgtaccaagg
ccacggaaccggcctagtgtccctcctccgccacagcctcccacctcaggggcaggcaca
gacaccaacggcatctgtggctctgcttacaaaatgatggattcggggatggcattcaag
gggctgagccgggtttacatccctgacctgtctggggagcagcagcctccaggctgccag
cccaaagacggcgaactcgactccgagagcaccgtcctctaa
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