Alosa sapidissima (American shad): 121699837
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Entry
121699837 CDS
T11137
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121699837 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121699837 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
asad02044
]
121699837 (sec31b)
Membrane trafficking [BR:
asad04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121699837 (sec31b)
Secretion system [BR:
asad02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
121699837 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
EIF3I
WDR55
TPR_Sec16
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
MukF_M
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
Prp18
Motif
Other DBs
NCBI-GeneID:
121699837
NCBI-ProteinID:
XP_041938229
LinkDB
All DBs
Position
24:14265010..14285067
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AA seq
1225 aa
AA seq
DB search
MRLKEILRTANQAWSPAAHHPAYLALGTSAQQLDASFNTTAALEIFEMDFADPSVEMKLR
GTLATSNRFHSLIWGHYGLGTDGSAGRLVGGSENGTITVYSPEVILASGEEAIVGQATKH
TGPVKALDYNPYQSNLLASGANDSEIYIWDLNNFSNPMTPGTKAQINEPAEDVSVVAWNR
QVQHILASASPSGKAVVWDLRKNEPIIKISDHSNRMHCSGMLWHPEVATQLVLASEDDRL
PVIQMWDLRFATSPLKVLENHTRGILSISWSQADPELLLSSAKDNRILCWNPATGEVIYE
LPTTNQWCFDVQWCPRNPALLSAASFDGHICVYSVMGGNLEAVQHSSVDKISASFDAMDP
FGTGQVLPPLQMPQSPTQQATIIPPLKKPPKWVRRPVGARFAFGGKLVTFESPKPSQQPA
PSLTPRQVFVSQVTTETEFLQRSRELQAALQSGSFSSYCQAKIQNAPSDCEQDVWKFLMV
NFEDEARVKFLKLLGFSKDELDKKISTCLGKSLQPNGHGVDANDLAEKMQALSAERASAS
PAAGSPRSVSPADFFSQIPKEKPSFQIPVSADTDGLISQALLVGNFEGAVELCLSDGRYA
EAILLSISGGEELLKKTQQRYLDRQKNSVSMLISSVVTQNWRDIVQSCELDNWKEALAAL
LTYAHPEEFAPLCDTLGARLENGASEKNRLQACLCYICSGNIEKLVECWAQQRDSSSPLA
LEDLVEKVMILRKSIERLRNGEVAVQSPVLAEKLTHYASLLASQGSLATAMSYLPDSSNQ
TSTKAIIQMLRDRLFHAQGMGAPSQPAPSSYPKPSAGGARQGPAAPAPAPAQNAHKQPQK
VPFQPSMPSRMPDAGMPPMPHTLTPQAPDPMAQPPTSHMGPPGMARPGPRPMYPQQVNPA
PGFPPSQPFHPQNVPMSAPPAFMPAPLMPLSSSAGSVPMMANPMGPPPPAGFIPTSSSVP
STPPTMPPNVLPGAPMPMFPGGPQSQGAGPPPMPGGSYPPVGSGYPQGGPGAPASRPVSA
PTVAPPPTGYFPWLSPQCEDEAQEGWNDPPAVRGGPRKKKVPENYTPPAPITAPVMGYPV
EAPLTQDHMQVPPGAPQEPTVQLLQQLPSERVEQKEIPAEHMILKNTFDSLVQRCQLAAG
DPQTKRKLDDAAKRLGHLYDKLRDQALSPSILGGLHEISRSVTARNYQHGLEVHTQIVSS
SNFSEISAFMPILKVVMTIANKLGV
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgaaggagattctaaggacggctaaccaggcatggagtcctgcagctcaccat
cctgcttacttggccttgggcacctctgcccagcagctggatgcctccttcaacactacc
gctgccctggagatttttgagatggactttgcagatccatctgtagagatgaaactcaga
ggaacccttgccacctctaacaggtttcatagtctgatctgggggcactatggcctggga
acagatggctctgcaggaaggcttgtgggaggaagtgaaaatggcaccatcacagtgtac
agcccagaagtcattctagcctcgggagaagaggccattgttggccaagccaccaaacac
acaggtccagttaaagcactggactacaacccttaccaaagtaacctactggcatctggg
gcaaatgattccgaaatatacatctgggacttaaacaatttcagcaatcccatgacaccg
ggaacaaaagcacagattaatgagccggctgaagacgtcagcgtggtggcgtggaacaga
caggttcagcacatcttggcgtcggccagtcccagtggcaaagctgtcgtctgggacctg
aggaagaacgagcccatcatcaagataagcgaccacagcaacaggatgcattgctctggg
atgctgtggcacccggaggtggccactcagctggtcctggcctcagaagatgatcggctg
cccgtcattcagatgtgggaccttcgcttcgccacatctcctctcaaagtcctggagaat
cacacaaggggaattctctccatatcgtggagccaagctgacccagagctgcttctcagc
agcgccaaagacaacaggatcctctgctggaaccccgccactggagaggtgatctatgag
ttgcccactaccaaccagtggtgctttgatgtccagtggtgccccaggaatccagccctg
ctgtctgctgcttcgtttgacgggcacatctgcgtctactctgtgatgggaggtaacctg
gaggccgtgcagcatagcagtgtggataagatatcagcatcatttgatgccatggacccc
tttgggactggccaggtccttcctcccctgcagatgccccagtcgcccacccagcaggcc
accatcatcccacccctcaagaagccccctaagtgggtcagacgcccagtcggggcccgc
tttgcgttcggggggaagctggtgaccttcgagagccccaagccctcccagcaacctgcc
ccctcgctcaccccgcggcaggtgtttgtgagccaggtcaccacggagacggagttcctc
cagcggtcgcgggagctgcaggcggctctccagtccggctctttctccagctactgccag
gccaagatccagaacgccccgtccgactgcgagcaagacgtctggaagttccttatggtc
aactttgaagatgaagctcgtgtgaagttcctgaagctgttaggtttcagcaaagatgaa
ttggacaaaaagatttccacatgtttggggaagagccttcagcccaatggtcatggtgtg
gatgctaatgacctggcggagaagatgcaggccctatctgctgagagagctagtgcgtct
cctgcagccggaagtccacgttcagtctccccagctgatttcttcagtcagatccccaaa
gagaaacccagcttccaaatcccagtctctgcagacacggacggcctgatcagccaggcc
ctgctggtggggaactttgagggggcggttgagctgtgcctgagtgacggccgctatgcc
gaagccatcctgttgtccatcagcggcggagaggagctcctgaagaagacgcagcagaga
tacctggaccgccagaagaacagcgtgtccatgctgatctcgtcagtggtgacgcaaaac
tggcgggacatcgtgcagagctgtgagctggacaactggaaggaggccctggctgccctc
ctgacctacgcccacccagaggagttcgccccgctctgtgacacgctgggcgctcgcctg
gagaacggagcctcagagaagaaccggctgcaggcgtgcctgtgctacatctgctcgggt
aacatcgagaagctggtggagtgctgggcccagcagagggactcgtcctcccctctggca
ctggaggacctggtggagaaagtgatgatcctgcgcaagtcgatcgagcgcctgcgtaac
ggcgaggtggccgtgcagagccccgtcctggccgagaagctgactcactacgccagcctg
ctggcctcgcagggcagcctggccactgccatgagttacctgcctgacagctccaaccag
acctccaccaaggctataatccagatgctacgggacaggctgttccacgcccaggggatg
ggtgcaccgagtcagccggcgccttcctcttaccccaaaccctcagcagggggcgccaga
caaggtcctgctgcgcctgctcctgccccggcccaaaatgcacacaagcagccacagaag
gtgccattccagccctccatgccctcacggatgccagacgctggtatgcccccaatgccc
cacaccttaaccccacaggctccggacccaatggcccaaccacccacctctcacatgggc
cccccgggcatggcccgtcctggccccaggcccatgtaccctcaacaagtaaaccctgca
ccagggttccctccttctcagccattccatcctcagaacgtacccatgagcgccccgcca
gccttcatgcccgcccctctgatgcccctttcgtcctccgcgggcagcgtgcccatgatg
gccaatcccatggggccgccgccacccgccggcttcatccccacctcatcgtcggtcccc
tccacgccccccaccatgccacccaacgtcctaccaggggcgcccatgcctatgttccca
ggaggcccacaaagccaaggtgcgggacctcccccgatgcccggtggctcctacccccca
gtggggtcgggctaccctcagggtggacctggggcgcctgcgtccaggccggttagtgct
ccaacggttgcaccccctccgacaggttattttccgtggctgagtccccagtgtgaggat
gaagcacaagagggctggaacgaccctccagcggtgaggggtggtcccaggaagaagaag
gttcctgaaaactacactcccccggctcccatcacggctcccgtcatgggctacccagtg
gaggcccccctgacccaggaccacatgcaggtccctccaggggctccgcaagagcccacc
gtgcagctcttgcagcagctcccctctgagcgtgtggagcagaaagagatccccgctgag
cacatgatcctcaagaacaccttcgacagcctggtacagagatgccagctggctgcagga
gacccgcaaacgaagagaaaacttgatgatgcggcaaagaggctaggccacctctacgac
aagctgagggaccaggctctgtctcccagcatcctcggcggcctgcacgagatcagccgc
agcgtgacagcccggaactaccagcacggcctggaggtgcacacgcagatcgtcagcagc
agcaactttagcgagatctccgcattcatgcccatcctcaaagtggtaatgaccattgcc
aacaagctgggcgtctga
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integrated database retrieval system
