Alosa sapidissima (American shad): 121699854
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Entry
121699854 CDS
T11137
Symbol
twnk
Name
(RefSeq) twinkle protein, mitochondrial
KO
K17680
twinkle protein [EC:
5.6.2.3
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
asad03029
]
121699854 (twnk)
Enzymes [BR:
asad01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121699854 (twnk)
Mitochondrial biogenesis [BR:
asad03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
121699854 (twnk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
DnaB_C
ATPase
AAA_22
AAA_29
AAA_16
AAA_23
TsaE
T2SSE
AAA_24
AAA_19
nSTAND3
ABC_tran
cobW
Motif
Other DBs
NCBI-GeneID:
121699854
NCBI-ProteinID:
XP_041938266
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Position
24:complement(13396003..13404518)
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AA seq
743 aa
AA seq
DB search
MWTTLCLRRAACLLRVAGGCSSRHAPQRCLTTFPLSRQPPWHSQTQAFAVPRLCYATKRW
SVSLNLCRTFKKDTKSTLDIPLGPVTVTDIKHYLRSKDVPFHDGYSCLHAPSIFCEQPPG
GSGTLSKDSFSIFIDKTTGQFLCMETGVEGSWEDLQDCLEVMQKEGQTSMNPNVLLGYPA
SLEEQEEREMELREVQRIWSSAVPFSDLHEEDAQLAKTMFGMGKLTNATLKRFNVRFFKP
TKSLVFPWFGGRDSGLRGVKLLSAGTDAAGQVVYTEATVPRPSSYHNLFGLPLVGRKDSE
VVLTGREADSMAVSQATGLPSLALPRGVSCLPPALLPYLEQFRRVTLWLGGDMRSWEASK
VFSRKLGLKRCSLVRPGNQQPSAAEALAQGRNLGRIVKSSIPAAHKSIVSFKQLRDDVYG
ELSNTEQVAGVKWTRFPDLTKILKGHRKGELTVFTGPTGSGKTTFISEYALDLCMNGVNT
LWGSFEINNVRLAKIMLTQFSMQRLEDNLEQYDAWADRFEELPLYFMTFHGQQSLKVVLD
TMQHAVYLYDISHVVIDNLQFMMGQENLSVDKFAVQDHIIGAFRKFATHSSCHVTLIIHP
RKEEDDKELQTASIFGTAKASQEADNVLILQEKKLVTCPGRRSLQVAKNRFDGDVGIFPL
EFNKGSLTFATPLKGKHKLRKVKLEKTEEGGVEGGEVEMSKEVGKKEKGEKIEKPAKAPR
TAKTVKGAQASGKTSPKGEGKDL
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgtggacgaccttgtgtctacggagggcagcctgtctcctgcgggtggcaggtggctgc
tcgtccagacacgcccctcaacgatgcctgaccacgtttccgttaagccggcagcctcca
tggcactctcagacgcaggccttcgctgttccacggctgtgctacgccaccaagcgctgg
tcagtttcactaaatctgtgccgcaccttcaagaaagacaccaagtccaccttggacatc
ccactcggtcctgtcacggtgacggacatcaaacattacctccgttccaaagacgtcccg
tttcatgacggctatagctgtctgcatgcccctagtattttctgcgagcagccaccaggg
ggctctggcacactaagcaaagacagcttctccatcttcattgacaagaccacaggccag
ttcctgtgtatggagactggggtggaggggagctgggaggacctccaggactgtttggag
gtgatgcagaaggagggtcagacgtcgatgaaccccaacgtgcttctggggtaccccgcc
agtctagaggagcaggaggagagggagatggagctgagggaggtgcagaggatctggtcg
agcgccgtgccattctcggacctccatgaagaggacgcgcagctggccaagacaatgttt
ggcatggggaagctgactaacgccaccttgaagcgcttcaacgtccgcttcttcaagccc
accaagagcctggtgttcccctggtttggtggacgcgactcggggcttcggggcgtcaag
ctcctctcggcaggaaccgacgctgccgggcaggtggtctacaccgaagccaccgtgccg
cggccctcgagctaccacaacctgtttggactcccccttgtcggccgcaaggactccgag
gtggtgctgaccggccgcgaggcggacagtatggcggtgagccaggcaacgggcctgccg
tcgctggcactgccccgcggcgtgtcctgcctgcccccggcgctgcttccctacctggag
cagttccggcgtgtcacgctgtggctgggcggcgacatgcgctcctgggaggcctccaag
gtcttctcgcgcaagctgggcctcaagcgctgctcgctggtgcggcccggcaaccagcag
cccagcgcagccgaggcgctggcgcagggacgcaacctgggccgcatcgtcaagtcgtcc
atccccgccgcacacaagtccattgtctccttcaaacagctgagggacgacgtgtacggc
gagctgtccaacaccgaacaggtcgccggggtcaagtggacgcgcttccccgacctcaca
aagatcttgaagggccatcgcaagggcgagctcacagtcttcacagggccaaccggcagt
ggtaagaccaccttcatcagcgagtatgccctggacctgtgcatgaatggtgtgaacacg
ctgtggggcagcttcgagatcaacaacgtgcggctggccaagatcatgctgacccagttt
tccatgcagcgactggaggacaacctggagcagtacgacgcctgggctgaccgcttcgag
gagctgccgctctacttcatgaccttccatggacagcagagcttgaaagtggtgctggac
accatgcagcatgctgtgtacctgtacgacatcagtcacgtggtcatcgacaacctgcag
ttcatgatgggccaggagaacctcagcgtggacaagtttgcagtgcaggaccacatcatc
ggagccttccgaaagtttgccacccacagcagctgtcatgtgaccctcatcatccacccg
aggaaggaggaggatgacaaggagctgcagacggcctccatcttcggcactgccaaggcc
agccaggaggcagataatgtgctgatcctgcaggagaagaagctggtgacctgccccggc
cgacgctccctgcaggtggccaagaaccgcttcgacggagatgtgggcatcttccccctg
gagttcaacaagggctcgctgaccttcgccaccccgctcaagggcaagcacaagctccgc
aaggtcaaactggagaagacggaggagggaggtgtagagggaggagaagtggagatgtcg
aaggaggtggggaagaaggagaaaggggagaaaatagagaaacccgccaaagcccctaga
acagccaaaactgtgaagggggcgcaggcgtcaggcaagaccagcccaaagggggagggg
aaggacctgtag
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