Alosa sapidissima (American shad): 121699862
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Entry
121699862 CDS
T11137
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
asad04990
]
121699862
Domain-containing proteins not elsewhere classified [BR:
asad04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121699862
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GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
LRR_5
Ig_VEGFR-1-like_5th
Ig_2
Fn3_ROS1
V-set
fn3
LRR_EndoS
VEGFR1-3_N_Ig-like
LRR_14
Motif
Other DBs
NCBI-GeneID:
121699862
NCBI-ProteinID:
XP_041938307
LinkDB
All DBs
Position
24:13190690..13193095
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AA seq
564 aa
AA seq
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MDTIYGTLAIISVLLQINSVSSFCVTGCSCTDDGFGRSLLCMETSLGRIPNNIPPDFTKI
RVENSHLTEIPQRSFSSVSALESLWLNFNDITLMNIKSLEGLTNLTELRLEGNKLRSIPW
TAFQDTPNLKILDLKHNRLDVLPESALRHLSGLTYLDLSFNQLTVISRDVFLNWPRFQRP
RPGRSEERTANAVLALHDNHWLCDCRLKGFVEFIKSVSPPVILMNSYLTCAGPASKEGKF
FHEVELTSCMKPETSTAQANVTLSLGASTSLQCLVKARPEPVVRWIYNLKNIRGFTVSQT
QVDEDTINSQLLIPSLHLVDRGVYTCTANNFIGNSSVRITVNVLPSNVSFKASAPYPLAS
AEDNVYIDFRIAKQTIYGITVEWFAVTDNPANTWYTIHFGRFDTPKAEMIYIGPGITSYS
VDKLQPLTKYKVCVALRNQTPLAGQCIVFMTGSDVNELEKRERLIHIIVIVCAMVLAVPA
GMYACTTDARVGCCHRLTEVVRSIQEHRKRVERSSDAASGERQGTFDSLQAASDEGLCRE
SVGDGRMRRRSEDKVQKGNSAQLY
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggacaccatctatggaacactagccatcatctctgtcctccttcaaatcaactctgta
tcatctttctgtgtcactggctgttcctgcaccgatgatggcttcggaaggtccctgctt
tgtatggaaacctccctgggcagaatccccaacaacatccctcccgacttcaccaaaatc
cgcgtagagaactcccacctaaccgagatcccccagaggtccttctctagcgtcagtgcc
ttggagtctctgtggctgaacttcaacgacatcaccctcatgaacattaagagcctggag
ggtctgaccaacctgaccgagctgaggcttgagggcaacaagctgcggtccatcccctgg
acggcattccaagacacccccaacctgaagatcctggacctgaagcacaaccggctagac
gtgctcccggagagcgccctgcgacacttgtcggggttaacctacttagatttatctttc
aatcagcttacggtcatctcaagggatgtctttcttaactggccccgcttccagcgtccg
aggccgggcaggagcgaggagagaacggccaatgcggtgctcgccctccacgacaaccac
tggctgtgcgactgccgcctgaaggggtttgtggagttcatcaagtcggtcagtccgccg
gtcatcctcatgaactcctacctgacctgtgccgggcctgcctccaaggagggcaagttc
ttccatgaggtggagctgacaagctgcatgaagcccgagacgtccactgcacaggccaac
gtcacactgtcccttggggccagcacctcactacagtgcctggtgaaggccagacccgag
cctgtggtccgatggatctacaacctcaagaacatccgaggattcacagtgtcccagaca
caggtggatgaggacaccattaactcccagctcctaatcccatccctgcacctggtcgac
cgcggcgtctatacctgcaccgccaacaacttcatcggcaactcctccgtccgaatcacc
gtcaatgtcttgccgagcaacgtctccttcaaggcctccgcgccctaccccctggcctcc
gccgaggataacgtctacatcgacttccgcattgccaagcagacgatttacggcatcacc
gtggagtggttcgccgtcacggacaacccagcaaacacctggtacaccatccactttggc
cgctttgacacgcccaaggcggagatgatctacattggcccgggcatcactagctattca
gtggacaagctgcagcccctcactaaatacaaggtgtgcgtggcgctacggaaccagacg
ccgctcgctggtcagtgcatcgtcttcatgacaggcagcgacgtgaacgagctggagaag
cgcgagcgcctcatccacatcatcgtgatcgtgtgtgccatggtgctggccgtgcccgcc
ggcatgtacgcctgcaccaccgacgcgcgcgtgggctgctgccaccgcctgaccgaggtg
gtgaggtccatccaggagcaccgtaagcgggtggagcggagcagcgacgcagccagcggc
gagcggcagggcaccttcgacagcctccaggcggctagcgacgagggcctgtgccgggag
tctgtcggggatggcaggatgcggcggcggtccgaggacaaagtgcagaagggcaacagt
gcccagctctactga
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