Alosa sapidissima (American shad): 121699929
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Entry
121699929 CDS
T11137
Symbol
myo1d
Name
(RefSeq) unconventional myosin-Id
KO
K10356
myosin I
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
121699929 (myo1d)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
asad01009
]
121699929 (myo1d)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121699929 (myo1d)
03036 Chromosome and associated proteins [BR:
asad03036
]
121699929 (myo1d)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121699929 (myo1d)
04147 Exosome [BR:
asad04147
]
121699929 (myo1d)
Protein phosphatases and associated proteins [BR:
asad01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121699929 (myo1d)
Membrane trafficking [BR:
asad04131
]
Endocytosis
Phagocytosis
Others
121699929 (myo1d)
Others
Actin-binding proteins
Myosins
121699929 (myo1d)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
121699929 (myo1d)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
121699929 (myo1d)
Exosome [BR:
asad04147
]
Exosomal proteins
Proteins found in most exosomes
121699929 (myo1d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
nSTAND3
Zeta_toxin
Sigma54_activat
AAA_16
AAA_22
NPHP3_N
AAA_18
IQ_SCN5A_C
TsaE
Motif
Other DBs
NCBI-GeneID:
121699929
NCBI-ProteinID:
XP_041938437
LinkDB
All DBs
Position
24:8579264..8677918
Genome browser
AA seq
1004 aa
AA seq
DB search
MAEHESLEFGKADFVLLDNVSIEEFMANLKLRFEKGRIYSYIGEVVVSVNPYRAMNIYGR
DTIEQYKGRELYERPPHLFAIADAAYKAMKRRNKDTCIVISGESGAGKTEASKYIMQYIA
AITNPNQRAEVERVKNMLLKSNCVLEAFGNAKTNRNDNSSRFGKYMDINFDFKGDPIGGH
INNYLLEKSRVIFQQEGERSFHSFYQLVKGAPDSLLRSLHIQKDSTAYSYIKVGGQVKSS
INDGADFKAVADAMKVIGFTAEEIQTVYKILAAIIHLGNLKFGTDGDVTLIETSKLVAIL
GDLLSTKEENVEKALLYRTVATGRDVIDKQHTAQEASYGRDALAKAIYERLFCWIVGRIN
DVIEVKNYDARVHGKNTVIGVLDIYGFEIFQNNSFEQFCINYCNEKLQQLFIQLVLKQEQ
EEYQREGIPWKHIDYFNNQIIVDLVEQQHKGIFAVLDEACMNVGKVTDEMFLQALNGKLA
KHAHYKSRKLLPTDKTLEFDRDFRIRHYAGDVVYSVVGFIDKNKDTLFQDFKRLLYNSSN
SVLKGMWPEGKLSITEVTKRPLTAATLFKNSMISLVENLASKEPYYVRCIKPNDVKSPLL
FEDERCRHQVEYLGLLENVRVRRAGYATRQIYARFLQRYKMISEFTWPNHDLPSDKEAVK
RLIQGCGFEHDVAYGKTKVFIRTPRTIFSLEEQRADMVQRIVLFLQKVWRGTIARMRYRR
MRAALIILRAYRRYKVKSYIREVNRRFKNVRSMKDNGKHVKWPTPPKVLRRFEEAIRNIY
NRWWAWSLIKGLSPEEMLQVRAKVATLECLKGQRADLGLLRAWEGNYLKRDSPETASSFT
LVSSDLQRKDKFMRVLFSSNVRKINHFNKAEDRAVLITDRHLYKMDPVKQYKPMKSIPLY
NVTGVSVSPGKDQLVVFHTKDGRDLVVCLQGMTPAGESRIGELVGTLFSHFKSEKRKLLV
NIGSPIQCSLNGRKCTVVVEPKINQSQPDFTKSRSGYILAVPVN
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacacgagagtttggagttcgggaaggcggattttgttcttctggacaacgtg
tccatcgaagaatttatggctaacctcaagctcaggtttgaaaagggccgcatctacagc
tacatcggggaggtagtggtgtcggtcaacccctaccgtgccatgaacatctatggccgc
gacacgatcgagcagtacaagggccgggagctgtacgagcgcccgccacacctgttcgcc
atcgcagacgcggcctacaaagccatgaagaggaggaacaaggacacctgtattgtcatc
tcaggggagagtggtgctggaaagactgaggccagcaaatacatcatgcaatacatcgct
gctatcaccaaccccaaccaaagagcagaggtggagagggtgaaaaacatgctgctgaag
tccaactgtgttctggaggctttcggtaacgccaagaccaaccgcaacgacaactctagc
cgcttcggcaagtacatggacatcaactttgacttcaaaggggaccccatcggcggccac
atcaacaactacctgctggagaagtcgagagtcatcttccagcaggaaggcgagagaagc
tttcactctttctaccagctggtgaagggagctccagattctctactgcgctctctgcac
atccagaaggactccactgcctacagctacattaaagtcggtggacaggtcaagtcatcc
attaatgatggtgctgatttcaaagctgtggccgacgccatgaaggtgattggtttcaca
gcggaagagatccaaaccgtttacaaaatcctggctgccatcattcatctgggcaacctg
aagttcggcacagacggcgacgtgacgctgatcgagacctccaagctggtggccatcctg
ggcgacctgctgtccaccaaagaggagaacgtggagaaggcgctgctctaccgcaccgtg
gccactggccgagatgtcatcgacaagcagcacacggcccaggaggccagctacgggcgc
gacgcgctggccaaggccatttatgagcgtctcttctgctggatagtggggcggatcaat
gatgtcattgaggtgaagaactatgatgccagggtgcatgggaagaacacggtcatcggc
gtgctggacatctatggctttgagatcttccagaacaacagctttgagcagttctgtatt
aactactgcaatgagaagctgcagcagcttttcattcagctggtgctaaaacaggaacaa
gaggagtaccagcgagaaggcatcccctggaaacatatcgactactttaataatcagatc
attgtggacctggtagagcagcaacacaagggtattttcgctgtcctggacgaggcctgt
atgaatgtaggcaaagtcacagacgagatgttcctgcaggcgctcaacggcaagctggcc
aaacatgcccactacaaaagccgaaagcttttacctaccgacaagactctggagtttgac
cgggacttccgcatcagacactacgctggggacgtggtgtactctgttgttggcttcata
gacaagaacaaggacaccctctttcaagactttaagaggctcctgtacaacagctccaac
tctgtgctgaagggcatgtggcccgaggggaagctcagcatcactgaggtgaccaagagg
ccactgactgcagccaccctcttcaagaactccatgatctcactggtggagaacctagca
tccaaggaaccctactacgtgcgctgcattaagcccaatgacgtgaagtcgccgctgctg
ttcgaggacgagcgatgtcggcatcaggtggagtacctgggcctgctggagaatgtgcgc
gtgcggcgcgccggctacgccacccgccagatttacgcccgcttcctccaaaggtacaag
atgatctcagagttcacatggcccaaccatgacctcccatcagacaaggaggctgtgaag
cgcctgattcagggctgtggctttgagcatgacgtggcctacggcaagaccaaggtgttc
atccgcacgccacgcaccatcttcagcctggaggaacaacgcgccgacatggtccagagg
atcgtgcttttcctgcagaaggtatggcgtggcaccattgcccggatgcgttaccggcgg
atgcgagccgccctcatcatccttcgggcctaccgtcgctacaaggtgaaatcctacatc
cgtgaggtgaaccgccgcttcaagaacgtccgtagcatgaaggataatgggaaacatgtc
aagtggcccacgccgcccaaagtgctgcgcaggtttgaggaggcgattagaaacatctat
aacaggtggtgggcctggtcgctgatcaaaggcctctccccagaggagatgctgcaggtg
agggccaaggtggccacgctggagtgcctgaagggccagcgagctgacctggggctgctg
agagcctgggagggaaactatctgaagcgggatagccctgagacagcctcctccttcacc
ctggtgtccagtgaccttcagcgcaaggacaagttcatgagggtccttttctcctccaat
gtccgcaagatcaaccacttcaacaaggcagaggaccgagctgtgctcatcactgacaga
cacctgtacaagatggaccctgtcaaacagtacaaacctatgaagagcatccctctctat
aacgttactggagtgagtgtgtccccagggaaagaccagctggtcgtcttccacaccaag
gatggccgagatttggtggtatgcctacaaggcatgacgccagcgggggagagccgtatc
ggcgagctggtggggaccctgttcagtcacttcaaaagtgagaagcggaagctgctggtc
aacatcggcagccccatccagtgcagcctgaacgggaggaagtgcaccgtcgtggtggag
cccaagatcaaccagtcgcagcccgacttcaccaagagccgctccggctacatcctggcc
gtgccagtcaactaa
DBGET
integrated database retrieval system
