KEGG   Alosa sapidissima (American shad): 121700031
Entry
121700031         CDS       T11137                                 
Symbol
wdr45b
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 3
  KO
K22991  WD repeat-containing protein 45
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:asad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    121700031 (wdr45b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:asad04131]
    121700031 (wdr45b)
Membrane trafficking [BR:asad04131]
 Autophagy
  Other autophagy associated proteins
   Others
    121700031 (wdr45b)
SSDB
Motif
Pfam: PROPPIN Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_WDHD1_1st BCAS3_WD40 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_VPS8 ANAPC4_WD40 Beta-prop_Vps41 WD40_Prp19 WD40 Beta-prop_IFT122_2nd Beta-prop_WDR3_2nd Beta-prop_HPS5 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML Beta-prop_WDR35_TULP_N Beta-prop_IFT140_2nd Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 DUF5711 DUF1513
Other DBs
NCBI-GeneID: 121700031
NCBI-ProteinID: XP_041938605
LinkDB
Position
24:complement(12394001..12402228)
AA seq 344 aa
MNLLPSNPHGNGLLYAGFNQDHGCFACGMENGFRVYNADPLKEKEKQEFLEGGVGHVEML
FRCNYLALVGGGKKPKYPPNKVMIWDDLKKKTVIEIEFSTEVKAVKLRRDRIVVVLDSMI
KVFTFTHNPHQLHVFETCYNPKGLCVLCPNSNNSLLAFPGTHSGHVQIVDLANTEKPPVD
IPAHEGALCCIALNLQGTRIATASEKGTLIRIFDTSAGHLIQELRRGSQAANIYCINFNQ
DASLICVSSDHGTVHIFAAEDPKRNKQSSLASASFLPKYFSSKWSFSKFQVPSGSPCVCA
FGTEPNAVIAICADGSYYKFLFNQKGECARDVYAQFLEMTDEKI
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgaatttattaccatcaaatccacatgggaatgggcttttgtacgctggatttaaccag
gaccatggttgctttgcatgtggaatggaaaatggattcagagtttacaacgcagaccct
ctcaaagaaaaagaaaagcaagaattccttgaaggtggtgtcggacatgtggagatgctt
tttcgttgcaactaccttgctctcgttggaggaggaaagaagcccaagtacccacctaat
aaagtcatgatctgggatgacctgaaaaagaagactgtaattgagatagaattctcaaca
gaagtcaaagcagttaagctccgacgagacaggattgtggtggtcctcgactccatgatc
aaagtcttcacgtttacccataacccgcaccaactacatgtgtttgagacgtgctacaac
cctaaaggtctttgcgtcctgtgtccaaacagcaacaactccttgttagcttttccgggc
actcactcgggccatgtgcagatagtggacctggccaataccgagaaaccgcccgtggac
attcccgcacacgagggagccctctgctgcatcgctctcaacctgcaaggcacaaggata
gccacagcctcagaaaaagggaccctgatcagaatattcgacacctctgctggccatctc
atccaggagctgagacggggctcacaggctgcaaacatctactgcatcaacttcaatcag
gatgcctcgctcatatgtgtgtccagcgaccatggcaccgtccacatatttgctgctgag
gaccccaaaaggaacaagcagtccagcctggcatcagccagtttcctccccaaatatttt
agctccaagtggagcttctccaagttccaggtcccatctggatcgccctgtgtctgtgcc
tttggaacggagcccaatgctgttatagcgatttgtgctgatggcagctattacaaattc
ctgttcaaccaaaaaggggagtgcgccagagacgtctacgcacagtttctggaaatgaca
gatgagaagatttga

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