Alosa sapidissima (American shad): 121700062
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Entry
121700062 CDS
T11137
Symbol
chad
Name
(RefSeq) chondroadherin
KO
K06248
chondroadherin
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04510
Focal adhesion
asad04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121700062 (chad)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121700062 (chad)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
asad00535
]
121700062 (chad)
Proteoglycans [BR:
asad00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
121700062 (chad)
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_14
LRR_9
LRRNT
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
121700062
NCBI-ProteinID:
XP_041938679
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Position
24:20481854..20495632
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AA seq
360 aa
AA seq
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MLCVKLAFAMALLAPATLAGPSQCPSQCHCHGDLQHVICDNVDLKKIPQVSETTRLLNLQ
RNNLGSLATGGFADMKGLISLHLQHCKIQEIAGQAFKGLKKLIYLYLSNNEISSIRPGAF
DDLGELTYLYLDGNRISALAKGIFAPMINLFILQLDNNQIRDLPPGVFAGAKDLRWLHLS
GNEIASVQPGSLDDVENLAILHLDRNKLSTYPLTAMSKLRVVEELTLSKNPLTFIPDNAF
RSFGRYMEKLHLDSMGLQKFADGAFSGVTALKTLYLNNNKLKSLPSSLEFSTITNLTLDN
NAWSCTCQLTNLRKWMDSSRQRLDAVCSSPSTQRGKQIRDSNVFSRCKGKSKRAKKGTRH
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcgtgaagttggcctttgccatggcgctccttgcgcccgcgacgctggcgggt
cccagccagtgtccgagccagtgccattgccacggcgacctgcagcacgtcatctgcgac
aacgtggacctcaagaagatccctcaggtgtcggagaccacgcgcctgctcaacctccag
cgcaacaacctgggctccctggccaccggcggcttcgccgatatgaagggccttatctcg
ctccacctgcagcactgcaagatccaggagatcgccggacaggcctttaaggggctcaag
aagctcatctacctctacctgtcgaacaacgagatctcctccatccggccgggcgccttc
gacgacctgggcgagctcacctatctgtacctggacggcaaccgcatcagcgccttggcc
aaaggcatcttcgcgcccatgatcaacctgttcatcctgcagctggacaacaaccagatc
cgcgacctgccccctggcgtcttcgccggcgccaaggacctgcgctggctgcacctgagc
ggcaacgagatcgcgtccgtgcagcccggctcgctggacgacgtggagaacctggccatc
ctgcacctggaccgcaacaagctgagcacgtacccgctgaccgccatgagcaagctgagg
gtggtcgaggagctgaccctctccaagaacccgctcaccttcatcccagacaacgccttc
cgcagcttcggccgctacatggagaaactgcacctggacagcatgggacttcagaagttt
gctgacggagcgttcagtggggtgactgcactaaagactctgtacttaaacaacaacaag
ctcaagtccctcccgagcagcctagagttctccaccatcaccaacctgaccctggacaac
aacgcctggtcctgcacctgccagctgaccaacctccgcaaatggatggattcgagccga
cagcgacttgacgccgtttgctcttcgccctccacccagaggggcaagcagatcagagac
agcaacgtcttcagccgctgcaaaggcaaatcaaagagggccaagaagggaacccgccat
taa
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