Alosa sapidissima (American shad): 121700295
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Entry
121700295 CDS
T11137
Symbol
med1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asad03021
]
121700295 (med1)
Transcription machinery [BR:
asad03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
121700295 (med1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
DUF3915
Motif
Other DBs
NCBI-GeneID:
121700295
NCBI-ProteinID:
XP_041939128
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All DBs
Position
24:complement(25321661..25350458)
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AA seq
1847 aa
AA seq
DB search
MAAVSGVPIQSSSPARELSLTGPTGGTSSVGERVKAEEGSESEKQSRVTALLEKLHAKHN
ASRPWQETCKVVRQAMEKRGGMNPVGHQLLLTCLETLQRALKVSSLPAMTDRLESIARQN
MLNSHLSPGGTDCYITSDLFYVEVQLEPTGQLKDVKVAHHGENPASCPELIQHLREKNFE
EFSKHLRGLVNLYKLPGDNKLKTKMYLALQSLESDLTKMMNMFRLATNANTVETILHGSV
GLLTPRSGGQLVTLQCYVSPYDVFEEGPGNQLNVMESNSPRPIGVSVSVTVEGTSTVCKL
PIAPLITGSHPVDNRGTPSFSSVTNSNCVDLPACFFLKMNRPMPFAFSFIQRMGNATGIP
VFDTHPVLSSLYELIIQSQLQEEGETSPQPTPHNMRFYASLPGQQHCYFLNGDAPVQDGL
SLQGALVSRIPFRHPAQVPALLDIIRHQAAYNTLIGSCVKRTQLKEDTPGLLQFEVCPLS
DSSFSVSFQHPVNESLVCVVMDVTDSRQVTCKLYKGSSDALICTDEFITKVVQRCMSIPV
TMRAIRRKAETIQADTPALSLIAETVESMVKKNLPPTGSPGYGMGTGDGSNPMGLAGVGG
GNTPTGGGTSGGAGGQFPGGPITSLFNMPRGSGGAGMDGMGQTGGGNQGQQQLQQQQQQQ
QQQGHGTDDFSKVTQNPILTSLLQITGNVGSSPSTQNAPGGSQPPQTPPPTSSPASNTKN
HPMLMNLLKDNPSQDFASLYGSSPLERQNSSGSPRTDNLGQPCPGGPGTKGKKKRPRDKG
VVGPGGVGLKQQQQPSQQQAGGPLPQHHHSHHPTEDDFHRELFSMDVDASQNPIFDVNLP
GDGLDTPHSITPAPSQCGTPPAGPGMPYHPQSHLQTTSQPQPLNRAVRLSSSDSIGPDIN
DILSDIPEQTTKGSGSGHGQHHMGGEEGGSLGTPPRDSSSSGQGSAVFDSDLFNTNSNEN
PFPDAADLIAEAATAATPNSDTSSTNFFPDTVDFNPELLSGQGTFSQNYFDDSSHSPDPD
LDLKGFGGGSQQNTPSSTPQNPTSHGHSTPDASLKDPFDMSMVFGGNSGGGKPLPGLAPD
LGDPHPTHSGGSQSPLMMGMGGGGGVGGSGEFKSGDIKVKQQQQQQQQQQQQQQQMMRGK
DDNGGGGGGGGSGGMVAGMGMSGSGGSEGKQVKRSRTPSSEGKSKEKPPKRKKLDPDGKS
PSHSSGGRPYTPPSGSMGSGGSMGGGGSKSPGSSGRSQTPPGGATPPIPKITIQIPKGTI
TGGKTSSHGGYTSSSSSGGSSGGTSGSGGSKGHHSHSSSSGKIKSSKMEGSMGQSGSSKP
VGGGSGSGMPSQSKSSSQGMGVGKPGSSPITKHGMSGSGSGGSGTGSGTKMKPQGGKPPG
SLMNPSIKPNISPSHSRSGGSEKLSSPMKHQQGQVPGTPPSSKAKSPIGSGGGSSGGSKS
SSGGGMGSQKQMGGGSSSSSSSSSSSSSASNSSSGSIPFSSGSQPQYGGGGGSGGGGGGG
GGGSNNPNAKGKSPSRNKKPSLTAVIDKLKNVGGVGIGGEEGPEGGCGGGGGGGGGGGVP
PGGGVGVVPPNMGPSSSSKHGMSSQGGEYKRDKVDKEGKSKVSVSGGNSSDKKMMDSKSG
GVSSTGVAKIIISKPDGGSPSIKQKVTLQKPEGCGEGSMRPQHMKQSPLFSGSTPKHDRS
SPSHSRSPGYTPLNPDSESESGSSSVAEKSHQNSPSSDDDQGGMRPLQHQPPQDYLSSMA
VSMGEKHKKHKKEKKKQKERERERERDRDRDRERERDKEKKKASMSCVPSSHPMKADSWS
RSPISAADPSMSMLGSERTSRPSPVYMRTEDDDLMDSAVTGHLEPFK
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgtgtcgggggtaccgattcaaagcagcagccccgcaagagaactttctctg
acgggtccaaccgggggcacttcttcagttggagagcgagtaaaagcggaagaaggatca
gagtctgagaaacagagtcgtgtgactgcattgctggagaaactacatgccaaacacaat
gcctcacgtccatggcaggagacctgcaaagtggtgcgacaagctatggagaagcgtggg
gggatgaaccctgttggtcaccagttgcttctcacttgtttggagaccttgcagagggcc
cttaaagtgtcgtctctccccgccatgacggaccgcctggagtctattgcgcggcagaac
atgttgaactctcacctgagcccaggtgggacggactgctacatcacctctgacctgttc
tacgtggaggttcagctcgagcccaccggacagctgaaggacgtcaaagtcgcccatcat
ggagagaacccagcgagctgtccggagctgattcagcacctgagagagaagaattttgag
gagttctccaaacatctcaggggcctagtcaacctgtacaagctccctggagacaacaaa
ctgaaaactaagatgtacctggctttgcagtctctggagtcagacctcaccaagatgatg
aacatgttcaggctagccaccaacgccaacacggtggagaccatcctgcacggcagcgtg
ggcctgttgacccctcgctccgggggacagctagtgaccctgcagtgctacgtgtcgccc
tacgacgtgttcgaggagggcccgggcaaccagctcaacgtcatggagtccaactcccct
cgtccgataggggtgagtgtatctgtgacggtggaggggacctccactgtgtgcaagctt
cccattgcgccgcttatcacaggatcacacccagtggacaacagggggacgccgtcattc
tcctctgtgaccaactctaactgtgtggacctgccagcctgtttcttcctgaagatgaac
cggcccatgcccttcgccttctccttcatacagagaatgggcaatgcaactggtattcct
gtgtttgacacacaccccgtgttgtcctccctctatgagctcatcattcagtcccagctg
caggaggaaggggagaccagcccacagcccacaccccataacatgcgcttctatgcatca
ttgccagggcaacagcattgttacttcctgaatggagacgcgccagtgcaggacgggctc
tccctccagggggcgctagtgtccaggatcccttttcggcatcccgcccaggtgcctgcc
ctgctggacatcattcggcaccaggccgcctacaacacgctgattggcagctgcgtcaaa
cgcacccagctcaaggaagacacccctggactactacagtttgaggtgtgccccctctct
gattccagtttcagtgtgtctttccagcatcctgtcaacgagtcgctggtttgtgttgtg
atggatgtgacggattccaggcaggtgacgtgtaagctctataagggctcatcagatgcc
ctcatctgcaccgatgagttcatcaccaaggttgtccagaggtgtatgtccatcccagtc
accatgcgtgccatcaggcggaaggcggagaccattcaggccgacactccggcattgtcc
ctgatcgcagagaccgtggagagcatggtgaagaagaacctgccccctactggcagccct
gggtatggcatgggcacaggagatggcagcaaccccatgggcctcgccggtgtcgggggt
gggaacacacccaccggtgggggcaccagcggaggagctgggggtcagtttccagggggc
cccatcacatcactcttcaacatgccccgcggttcaggaggggcaggaatggatggcatg
gggcagacaggtgggggcaaccaggggcaacagcagctccagcagcagcagcagcagcag
caacaacagggccacggcacagatgacttcagcaaggtcacgcaaaaccccatcctgacc
tcgctgttgcagatcaccggcaacgtcggttctagcccctctacccagaatgccccaggg
ggctcccagcccccccagacccctccgccgacctcctccccagccagcaacaccaagaac
caccccatgctgatgaacctactgaaggacaacccctcgcaggactttgcctcactgtat
ggaagcagcccgttagaaagacagaattcctcagggtcacccagaaccgataaccttggc
cagccctgccccggcggacccggtacgaagggtaagaagaagcgacccagggacaaaggg
gtggtgggaccaggtggagtcggtttgaaacagcaacagcagccttcccaacagcaggcg
ggtggcccccttccccagcaccaccactcccaccacccaaccgaagacgacttccaccgc
gagctcttctccatggacgtcgacgcgtcgcagaaccccattttcgacgtcaaccttccc
ggcgatggtctggacaccccccacagcatcacgccagcccccagccagtgtggaactcct
ccggctggcccagggatgccctaccacccacagtcccacctgcaaaccacctcacagcct
cagcccctcaaccgagcggtgcggctctctagctctgacagcatagggcctgacataaac
gacatcctgtcggatattccggagcagaccactaaaggaagtggcagcggtcacgggcag
caccacatgggaggggaggaagggggatccctgggcacccctcccagggattcgtcaagc
tcagggcaggggagcgcagtttttgactcggacctctttaacaccaacagcaacgagaac
cctttccccgacgcggcggacctcatcgccgaggctgcaactgcggccacccccaacagc
gacacctcgtcaactaacttcttccccgacacagtagacttcaacccggagttactgtct
ggccaaggaaccttctcccagaattattttgatgacagttcccacagccccgacccggac
ttagacctgaaggggtttgggggcggcagccagcagaacaccccgtctagcaccccgcag
aaccccacctcccacggccacagcaccccagacgcctccctcaaggaccctttcgacatg
agcatggtttttggggggaacagtggcgggggcaagccccttccgggcctggctccggat
ctgggggacccccaccccacccactcgggtggaagccagagtcccctcatgatgggtatg
ggaggaggaggaggagtaggtggcagcggggagttcaagagtggcgacatcaaggtgaaa
caacaacagcagcagcagcaacagcagcagcaacagcagcagcagatgatgagagggaag
gatgataacggaggaggtggtggaggaggagggagtggaggcatggttgcaggcatgggc
atgagtggatcagggggctccgaagggaagcaggtgaagcggagtcgcaccccgtccagc
gagggcaagtccaaagaaaagccacccaagcgcaagaagctggatcccgatggcaagtcg
ccctcgcacagctctggggggcgtccctacaccccgcccagcggcagcatggggtcaggg
ggctccatggggggaggagggtcaaagtcgccagggagttcaggacgatcgcagaccccg
cccggaggtgccaccccacccatccctaaaatcaccatccagatccccaaggggacgata
acgggcgggaagacgtcctcacacgggggttacacgtccagcagctcgtcgggggggagc
tctggaggaacgagtggctcaggcggaagcaagggccaccattcacactcctcgtcctca
gggaagatcaaaagcagcaagatggagggttccatgggacagagcggcagctccaaaccg
gtgggtggagggagtggcagcgggatgccctcccagtccaaaagctcctcccagggaatg
ggggtgggcaagccaggctcgtcccccatcaccaagcacggaatgtctggatcaggaagc
ggcggcagcggaacgggaagtgggacgaagatgaagcctcaaggcgggaaaccccctggg
tcccttatgaatcccagcatcaagccgaacatctccccttcccactcccgctcagggggc
tcagagaaactctcttcccccatgaagcatcaacaaggccaagttccgggcaccccccct
tcctccaaggcaaagtcccccataggctcaggtggggggagttcgggggggtccaagtcc
tcctccggtggtggcatgggttcccagaagcagatgggtggaggttcctcctctagctcc
tcctcttcctcttctagttcttcagcgagcaactcctcctctgggtcgattcctttttcc
tcaggtagccaaccccaatacgggggaggagggggtagtgggggaggcggaggaggaggt
gggggtgggagcaacaacccaaatgcgaaaggcaagtctcctagtcgcaataagaaaccc
tcacttactgcagtgatagataagctgaagaatgtcggtggggtgggtataggtggggag
gaaggccctgagggaggctgtggaggtgggggtggagggggtggaggtggaggtgtgccc
cctggtggtggagtaggggtagtgcctcccaacatggggccgtcatcctcctctaaacat
ggcatgtcctcacagggcggggagtacaagcgggacaaggtcgacaaggagggcaagtct
aaggtgtccgtctccgggggcaacagcagcgacaagaagatgatggactccaaaagcgga
ggcgtgagcagcaccggcgtggccaagatcatcatcagcaagcccgacgggggttccccc
agcatcaagcagaaggtgaccctgcagaagcccgaggggtgcggggagggctccatgcgg
ccccagcacatgaagcagtcgcctctgttcagcggctccaccccgaagcacgaccgcagc
tcgccgagccacagccgctcgccgggctacacgccgctgaaccccgacagcgagagcgag
tccggcagcagctcggtggccgagaagtcgcaccagaactcgccgagctcggacgacgac
cagggcggcatgcggcccctgcagcaccagccgccgcaggactacctgagctcaatggcg
gtgagcatgggcgagaagcacaagaagcacaagaaggagaagaagaagcagaaggagcgc
gagcgggaacgggagcgcgaccgagaccgggaccgggaacgcgagcgggacaaggagaag
aagaaggcgtccatgtcgtgcgtgccgtcctcccaccccatgaaggcggacagctggtct
cgctcacccatctcggcggctgacccctccatgtccatgctggggtcggaacgcacgtcg
aggcccagccccgtttacatgcgcactgaggacgacgacctcatggactctgctgtcaca
ggccacctagagccttttaagtga
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integrated database retrieval system
