Alosa sapidissima (American shad): 121700359
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Entry
121700359 CDS
T11137
Symbol
bms1
Name
(RefSeq) ribosome biogenesis protein BMS1 homolog isoform X1
KO
K14569
ribosome biogenesis protein BMS1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
121700359 (bms1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asad03009
]
121700359 (bms1)
Ribosome biogenesis [BR:
asad03009
]
Eukaryotic type
90S particles
GTPase
121700359 (bms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
GTP_EFTU
Tsr1_G-like
MMR_HSR1
AAA_22
AAA_16
nSTAND3
AAA
Motif
Other DBs
NCBI-GeneID:
121700359
NCBI-ProteinID:
XP_041939202
LinkDB
All DBs
Position
24:10253112..10277258
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AA seq
1289 aa
AA seq
DB search
MEGKERKEQKKHQHKHSGPKAQKKKNKKQSGQEPDQDERKRNPKAFAVQSAVRMARTFHR
TQDLKTKKHHIPLVDRAPLEPPPIVVVVVGPPKVGKSTLIRCLVKNYTRQKLADICGPVT
IVSGKKRRLTLIECPNDINSMIDLAKVADLVLMLIDASFGFEMETFEFLNICQVHGFPRI
MGVLTHLDSFKNNKSLHKTKKRLKHRFWTEVYQGAKLFYLSGMVYGEYQIREVKNLGRFV
SVMKFRPLVWQTSHPYVVADRMEDLTNPEDVRQDPKCDRTVCLYGYLRGTFLKNKGQVHI
PGVGDFGVGDVSFLPDPCPLPEALKKRALNEKERMIYAPMAGVGGVVYDKDAVYIDVPGG
LAKQQQEEVRPTTELVQSLIGTHATLDAKMAASKVSLFTDTAALTQEEVEESGAKQGPTE
SRVWDPETNRERRKAVFSEEDNEDDDDDDDDEEDEDSDDEDGGEEDEDEEVDEDSEEDDD
DDEEEDDEEESGPPVAKKPKAVEKEEAKDTEKDAPPVKRQKVEEVGKRKAEKEVIAEMPA
FADSEDDLENSEEESGDEESEEEEDEMEGEEEEQVKGKGAADSGHCSEEEEADEAEDDDE
DEEEEEGESSDDEEDKDSEMEEETSSAKIPEKKAKGSKVTTQQQDQMEEEEEEDEPSFDT
EGALRWKQDLAQKAAEAYLRRQQAAPNLRKLVYGTVAEEDDEAEEEEVGGLFKVSRPEKG
KRLRADAADCSRFEPDTSHDWDQDEMLDSIKDCFVTGKWEGDKDAATLLKEDEELYGDFE
DLETGEVHRGQARAEGDKAEGGSAEDDDGDEEEDEEKPLVKMDDEEVQKNKRLEKKRRLK
ERFDSAYDDGGDATYFDDLKEELKKQAELNRSEFENVDDETRVQYEGFRPGMYVRMEIPS
LPCEFVTNFDPHYPIILGGLGASEGNVGYVQMRLKKHRWHGKILKTRDPLILSMGWRRFQ
TIPLYYIEDHNGRQRLLKYTPEHMHCGATIWGPITPQGTGFLAVQSVAGTKAGFRIAATG
VVLDLDKSVTVVKKLKLIGYPYKIFKNTSFIQGMFNTVLEVAKFEGASIRTVSGIKGQIK
KALRTPPGCFRATFEDRLLMSDIVFLRSWYPVSVPQLYNPVTSLLLPVGHKASWTGMRTL
GQLKHDMGIRNKPNKDSLYKPVERQPRRFNRLQIPRQLQKSLPFKSKPKQQQAKGKTPRD
LVRPAVIREPHERQVAQLLHALGTVYGNKRKAARTEQHAKHKDFLRQKEQQEEEKQKRLK
EEKKKLYRVMGQKEKKQLKSSLKGKAKDD
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggagggtaaagagcgcaaggagcagaagaaacatcagcacaaacacagtggccctaag
gcgcagaagaagaagaacaagaagcagagtggacaagagcctgatcaagatgagcgcaag
agaaatcccaaggcctttgccgtccagtcagctgtgcggatggccaggaccttccacagg
actcaagatctgaaaaccaagaagcatcatattcccctggtggaccgagcccctttggag
cctccgcctattgtcgtggttgtagtagggcctccaaaggttggcaagagtaccctgatt
cgctgccttgtcaaaaactacacacgtcaaaagctagcggacatctgtgggccagtaaca
atagtatcaggtaagaagaggcgcctgaccttaattgaatgtcccaatgacatcaactca
atgatagatttggcaaaggtggctgacctggtattgatgctgattgatgccagctttggc
ttcgagatggagaccttcgagttcctcaacatctgccaggtgcacggctttccccgcatc
atgggcgtgctaacacacttggactccttcaagaacaacaaatccctgcacaagaccaag
aaacgcctcaagcacagattctggactgaggtctaccagggtgccaagctgttctatcta
tctggtatggtctatggagagtaccagattcgggaagtgaagaacctggggcgcttcgtc
tctgtcatgaagttccgacctctggtgtggcagacctctcacccttacgttgtggctgac
cgtatggaggatctgaccaatcctgaggatgtcaggcaagaccctaaatgtgacaggacc
gtctgtctctatggctatctgcgtggcacattcctgaagaataagggccaagtccacatc
cctggtgtgggagactttggggtgggcgatgtgagcttcctgccggacccctgcccgctg
ccagaggccctgaagaagagagccctgaacgagaaagagaggatgatctacgcccctatg
gctggcgtcgggggagttgtgtatgacaaggacgcggtgtacatcgatgtgccaggtggc
cttgctaagcagcaacaggaggaggtgaggcccaccacagagctggtgcagtcgctcatt
ggcacgcatgccaccctggatgccaagatggctgccagtaaagtgtccctgttcacagac
acggcagcgctgacgcaggaggaggtggaagagagcggggccaagcaagggcccacagag
agccgtgtatgggacccagagacaaatagagagaggaggaaggctgtcttcagtgaggaa
gacaacgaggacgacgacgatgatgatgatgatgaggaagatgaagatagtgatgacgaa
gatggcggagaagaggatgaagacgaggaagtagatgaagacagtgaggaagatgatgat
gatgatgaggaggaagatgatgaagaggagagtggtcctcctgtggcgaagaagcccaaa
gctgtggagaaggaggaggcgaaagacacggagaaggatgctcctccagtgaagagacag
aaggtggaggaggtggggaagaggaaagcagagaaggaggtgatcgcagagatgccagcg
tttgccgacagcgaagacgacctggagaatagtgaggaggagagcggagacgaggagtct
gaagaggaggaagatgagatggaaggagaggaggaggagcaggtgaaaggaaagggagca
gcagattctggacactgctctgaagaagaggaagctgatgaagcagaggatgacgatgaa
gacgaagaggaagaggaaggtgaaagtagtgatgacgaggaggacaaagactctgaaatg
gaggaagaaacctccagtgctaaaattccagaaaagaaagccaaagggtcaaaggtcacc
acacagcagcaagatcagatggaggaggaggaggaggaggatgagccgagcttcgacacc
gaaggagccctgcgctggaaacaagacctggcccagaaagccgctgaggcatacctgcgg
agacagcaggccgccccaaacctgcgcaagctggtgtatggcacagtggcggaagaggat
gatgaggctgaagaagaggaggtgggtggattgttcaaggtcagccggccggagaagggc
aagaggctgcgagccgacgccgcggactgctcccggtttgagccagacaccagccacgac
tgggaccaggacgagatgttggactccataaaggactgctttgtgactggcaaatgggaa
ggggacaaagacgctgccacccttctgaaggaggatgaggagctctacggggactttgaa
gatctggagacgggggaggtgcaccgcggccaagccagggcggagggggacaaggctgag
ggtggcagcgctgaagatgacgatggtgatgaagaagaagacgaggagaagccactggtg
aagatggacgacgaggaggttcagaaaaacaagcgtctggagaaaaaaagacgcttgaag
gagcgcttcgactcggcctacgacgacggcggggacgccacctacttcgatgacctcaag
gaggagctgaagaaacaggctgagctgaaccggtccgagtttgagaacgtggacgacgag
acacgcgtgcagtacgagggcttccggcccggcatgtacgtccgcatggagatccccagc
ttgccctgcgagtttgtcaccaacttcgacccccactatcccatcatcctcggcggcctg
ggcgccagcgaaggcaacgtgggctacgttcaaatgcgtctgaagaagcaccgctggcac
ggtaagatcctgaagacgcgcgacccgctcatcctgtccatgggctggcgccgcttccag
accatccccctctactacatcgaggaccacaacgggcgccagcgcctgctcaagtacacg
cccgagcacatgcactgcggcgccaccatctgggggcccatcacccctcaaggcacgggc
ttcctggcagtgcagtccgtcgccggcacaaaggctggttttcgcattgcggcgacagga
gtggtccttgacctggacaagtcagtgaccgttgtgaaaaagttaaagctgatcggatac
ccttacaagatcttcaagaacacctcttttattcagggcatgttcaacaccgtgctggag
gtggccaagttcgagggagcgtccatccggacagtcagcggtattaaaggtcagatcaag
aaggccctgaggacaccacccggatgtttccgtgccaccttcgaggaccggctcctcatg
agcgatattgtgttcctgcgctcctggtacccggtgtcggtgccccagctgtacaaccca
gtgacgtccctgctgctgcccgtgggccacaaggccagctggacgggcatgaggaccctg
ggacagctcaagcatgacatgggcatccgcaacaaacccaacaaggactccctctataag
cccgtagagaggcagccgcgccgcttcaaccggctacagatcccccggcagctgcagaag
tctctgcccttcaagagcaagcccaaacagcagcaggccaagggcaagaccccacgtgac
ctcgtacggcccgccgtcatccgcgagccccacgagcgccaggtggcgcagttgctccac
gcgctgggcaccgtctacgggaacaagcggaaggcggcgcgcaccgagcagcatgccaag
cacaaggacttcctccgtcagaaggagcagcaggaggaggagaagcagaagaggctgaag
gaggagaagaagaagctctaccgtgtcatgggccagaaggagaagaagcagctcaagtca
agcctgaagggcaaggccaaggacgactga
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