Alosa sapidissima (American shad): 121700450
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Entry
121700450 CDS
T11137
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121700450 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121700450 (mid1)
Enzymes [BR:
asad01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121700450 (mid1)
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121700450 (mid1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
PRY
Pur_ac_phosph_N
zf-C3HC4
FN3_DSCAM-DSCAML_C
zf-RING_2
zf-C3HC4_3
TRIM_CC
zf-RING_5
zf-C3HC4_2
NDNF
Motif
Other DBs
NCBI-GeneID:
121700450
NCBI-ProteinID:
XP_041939337
LinkDB
All DBs
Position
2
Genome browser
AA seq
691 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFHCAHRILVSHCMTNESVESISAFQCPTCR
YVITLSPRGLEGLKRNVTLQNIIDRFQKASLSGPNSPSETRRERAASSSATDGPAMTSPG
ERVQCQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPLPDQHLRGLM
CLEHEDEKVNMYCVTDEQLICSLCKLVGRHRDHQVAALNERYDKLKREAARSPSEEREQE
EADQQTLDSNLSNLIKRNNELESLMGKLIQTCQHVEVNAARQENKLLEECDVLIDIIQQR
RQIIGSKIKEGKVVRLRKLAQQIANCKQCIERSSSLITQADHTLKETDHARFLQTAKNIS
ERVSMATASSQILIPEINLKDTFDTFTLDFTREKKMLENLDYLTAPNPPVIREELCTASH
DTITVHWTSDDEFSVVSYELQYAIFTGQSNVVSLCNSADSWMIVPNIKQNHYTVHGLQSG
TRYIFIVKAINQAGNRSSEPGKLKTNSQPFKLDPKSAHKKLKVSHDSLTVERDETSSKKS
HSQDRFSSQGSYGVTGNVYIDSGRHYWEALIGGSTWFAVGIAYKSAPKHEWIGKNSATWV
LCRCNNAWVVRHNSKEMPIEPSPHLRRLGVLLDYDAGYLSFYDAVGSHHLYTYDITFIQP
VCPVFNVWNKCLTVLTGLPIPDHLETTDSQD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgcccaatctgtctggagctctttgaggatccg
ctgctgctgccgtgcgcccacagcctgtgcttccactgtgcccatcgcatcctggtgtcc
cactgcatgaccaacgagtccgtggaatccatcagtgctttccagtgtccaacctgtcgt
tatgtcatcaccctcagcccgcgaggcctagagggactcaaacggaacgtcaccctacag
aacattatcgatcgtttccagaaggcgtcgctgagcgggcccaactccccgagcgagacg
cgccgcgagcgcgccgcctcttcctccgccaccgacggccccgccatgacctcgcccggc
gagcgcgtgcagtgccagttctgcgagcaggacccgccgcaggacgcggtcaagacgtgc
gtcacctgcgaggtgtcctactgtgacgagtgcctcaaggccacgcaccccaacaagaag
cccttcactggccaccggctcattgagccgctgcctgaccagcacctgcgcggcctcatg
tgcctggagcacgaggacgagaaggtcaacatgtactgtgtcaccgacgagcagctcatc
tgctcgctctgcaagctggtgggacgccaccgtgaccaccaagtggccgcgctcaatgag
cgctacgacaagctcaagagagaggctgcccgctctccgagtgaggagagagaacaggag
gaagccgaccagcaaactctggattctaatcttagcaacctgatcaagaggaataatgag
ctggagagtctcatgggcaagttgatccagacctgtcaacatgtagaggtaaatgcggct
cgacaagagaacaagcttcttgaggaatgtgatgtcctgattgatatcatacaacaaagg
agacagatcatcggctccaaaattaaggaagggaaggttgttcgtctgaggaaacttgca
cagcagatagcgaattgcaagcagtgcatagagagatcctcctctctcatcactcaggct
gatcacaccctgaaggagacagaccatgctcgcttcctgcagaccgccaaaaacatctca
gagagagtctctatggctacagcatcatctcaaatcctgataccagaaataaatctgaaa
gacacatttgacacatttacattagacttcacccgggagaagaaaatgctggaaaatttg
gattatctcacagcccccaatccccctgtaatccgagaggaattatgcacggcatctcat
gacacaatcactgtccactggacatctgacgatgagttcagtgttgtttcctatgaactg
cagtatgccatctttactggacaatccaatgttgtcagtctgtgtaattcagcagacagc
tggatgattgtgcccaatataaagcagaaccactacacagtgcatggcctgcagagcggt
accaggtacatcttcatcgttaaggccattaaccaggcagggaaccgcagcagcgagccg
ggcaaactcaagaccaacagccagcccttcaaactggacccaaagtctgcccacaagaag
ctgaaggtgtcccatgacagcctgacagtggagagagacgagacgtcgtctaaaaagagc
cacagtcaagaccggttcagcagccagggaagctacggagtcacaggaaatgtctacatt
gacagtggccgccactactgggaggctctgattggagggagcacatggtttgctgtgggc
attgcatacaagtctgcccctaagcacgagtggattggcaagaactctgccacgtgggtg
ctgtgccgctgcaacaacgcctgggtagtgcgacacaacagtaaagagatgcccatcgag
ccgtccccacacctgcgccgtctgggcgtgctgctggactacgacgccggctacttgtcc
ttctacgacgccgtgggctcccaccacctctacacctacgacatcaccttcattcagccg
gtgtgtcccgtcttcaacgtgtggaacaagtgtttgactgtcctcacgggactgcccatt
cccgaccacctggagacgacagattctcaggactaa
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