Alosa sapidissima (American shad): 121700468
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Entry
121700468 CDS
T11137
Name
(RefSeq) DDB1- and CUL4-associated factor 7-like
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121700468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
asad04121
]
121700468
03036 Chromosome and associated proteins [BR:
asad03036
]
121700468
Ubiquitin system [BR:
asad04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121700468
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
121700468
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EIPR1
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_RIG_2nd
Beta-prop_Aladin
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_WDR3_2nd
MIOS_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_Gbeta
WDR55
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR41
WD_LRWD1
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
121700468
NCBI-ProteinID:
XP_041939368
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All DBs
Position
24:7047956..7055105
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AA seq
341 aa
AA seq
DB search
MSHGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLEEESSEFVC
RNTFDHPYPTTKIMWIPDTKGVYPDLLATSGDYLRIWRVGETDTRLECLLNNNKNSDFCA
PLTSFDWNEVDPNLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDIA
FSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATMA
MDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPR
AIEDPILAYTAEGEINNVQWASTQPDWISICYNNCLEILRV
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacggaaaacgaaaagagatctacaaatacgaggcaccatggactgtgtacgcg
atgaattggagcgttcggcccgacaagcgcttccgtctggctcttggcagcttcgtggaa
gaatacaataataaggttcagctggtgggtctggaggaggaaagctcagagtttgtgtgt
cggaacacctttgaccacccgtaccccacaactaaaatcatgtggatcccagacaccaaa
ggggtgtatcccgatttattggccacaagtggggactatctccgtatctggagggtggga
gagacagacacgcggctggagtgcctcctaaacaacaacaaaaactctgacttttgtgcc
cccctcacctctttcgactggaacgaagttgacccaaatcttttgggcacgtccagcata
gataccacctgtaccatctgggggctggagacaggacaggtcttgggtcgggtcaacttg
gtttcgggccacgtcaaaacacagctcatcgctcatgacaaagaggtttatgacattgca
ttcagccgggcgggtggaggtcgggacatgtttgcgtcggtgggggcagatggctcggtg
cgcatgttcgacctgcgccacctggagcacagcaccatcatctacgaggacccccagcac
cacccgctgctgcgcctctgctggaacaagcaggaccccaactacctggctaccatggct
atggacggcatggaggtggtgattttggacgtgcgagtgccctgcactccagtggctagg
ctgaataatcaccgggcgtgtgtgaacggcattgcctgggccccccactcctcctgccac
atctgcacagcagcggacgatcaccaggcgctgatctgggacatccagcagatgccgcgc
gccatcgaggaccccatcctggcctacacggccgagggcgagatcaacaacgtacagtgg
gcctccacccagcccgactggatctccatctgctacaacaactgcctggagatcctgcgc
gtctga
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integrated database retrieval system
