Alosa sapidissima (American shad): 121700595
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Entry
121700595 CDS
T11137
Symbol
rhbdl1
Name
(RefSeq) rhomboid-related protein 1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asad01002
]
121700595 (rhbdl1)
Enzymes [BR:
asad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
121700595 (rhbdl1)
Peptidases and inhibitors [BR:
asad01002
]
Serine peptidases
Family S54: Rhomboid family
121700595 (rhbdl1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580_M
DUF5580
EF-hand_11
Motif
Other DBs
NCBI-GeneID:
121700595
NCBI-ProteinID:
XP_041939606
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Position
24:complement(5862957..5889885)
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AA seq
372 aa
AA seq
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MDRSSLFQLIQEQLDPDQTGFVAVENFTSLVQHHELQLDPNKLDMLFALVHANERGQICY
QELIELLSNKRSSSFRKAIANGRRTLQREILLDETGLGVYKRFVRYVAYEILPCETDRRW
YFHQNRLCPPPVFMAIITIIQIVVFLCYGVMLNKWVLQTYQPDFMKSPLVYHPGHRAQVW
RFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVVAGSLTVSITDMRA
PVVGGSGGVYALCSAHLANVVMNWAGMKCPYKLLRMILALVCMSSEVGRAVWLRFSPPLP
SSGPQPSFMAHLSGAVVGISMGLLILRSYEESLQTQCSWWVLVFSFITFLLFAIFWNIFA
YELLGVQIPPPP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggataggagctccctgtttcagctcattcaagagcagctggaccccgatcagactggt
tttgtggcggtagagaactttaccagtctggtgcagcatcatgagctgcaactagacccc
aacaagctggacatgctgtttgctctggtgcacgccaacgagcgaggacagatctgctac
caggagctcatcgagctgttgagcaacaagcgcagcagcagtttccgtaaggccatcgca
aatgggcgacgtactctgcagcgcgagatcctattggacgagacggggctgggtgtgtac
aaacgctttgtgcgctacgtggcgtacgagatcctgccctgcgagacggaccgccgctgg
tacttccaccagaaccgcttgtgcccaccgccagtgttcatggccatcatcaccatcata
cagattgtggtgttcctgtgctatggcgtgatgctgaataagtgggtcctgcagacgtac
cagccggacttcatgaagagtccactggtctaccacccaggacacagggcccaggtgtgg
aggttcttcagctacatgttcatgcatgtggggctggagcagctgggcttcaacgctttg
ctgcagctgatgatcggggtaccgctggagatggtgcacggcatcctacgcatcagtctg
ctctacatggccggagtagtggcaggttcgctgacagtctccatcactgacatgcgtgcc
cctgtggtggggggctccgggggtgtctacgctctctgctctgcccatctcgccaacgtt
gtcatgaactgggcaggcatgaagtgtccgtacaaactgctgcgaatgatcctggccctg
gtctgcatgagttccgaggtgggccgcgcggtgtggctgcgcttctcgcctccgctgccg
tcgtcggggccgcagccgagcttcatggcgcacctgtcgggcgcggtggtgggcatcagc
atgggcctgctgatcctgcgcagctacgaggagagcctgcagacgcagtgctcctggtgg
gtgctcgttttctccttcattaccttcctcctcttcgccatcttctggaacatcttcgcc
tacgagctgctcggcgtccagattccgccgccgccatga
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