Alosa sapidissima (American shad): 121700665
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Entry
121700665 CDS
T11137
Symbol
calcoco2
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 2
KO
K21348
calcium-binding and coiled-coil domain-containing protein 2
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04137
Mitophagy - animal
asad04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121700665 (calcoco2)
04137 Mitophagy - animal
121700665 (calcoco2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121700665 (calcoco2)
03029 Mitochondrial biogenesis [BR:
asad03029
]
121700665 (calcoco2)
Membrane trafficking [BR:
asad04131
]
Autophagy
Xenophagy
Cargo receptors
121700665 (calcoco2)
Mitochondrial biogenesis [BR:
asad03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
121700665 (calcoco2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKICH
Macoilin
CCDC39
GAS
HAUS-augmin3
ATPase
DUF7801
ERM_helical
Thioredoxin_8
Zn-C2H2_12
Motif
Other DBs
NCBI-GeneID:
121700665
NCBI-ProteinID:
XP_041939725
LinkDB
All DBs
Position
24:complement(9418778..9424820)
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AA seq
562 aa
AA seq
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MNESPEAETFPVEMESTTTYSQVVFIDVPRSYPPNTSVTCCYTLAAGLQPNPRDWIGIFK
VGWNTTQNYHTFLWVEPCLDRLGPDPVRRQVVFTDYYLPKDDGDYQFCYVDSNGQVRGAS
TPFCFENPQDHALYTSLENDILVITTQEQTEQMEKEREELRRELKQIKEDKQTLRNELDE
KLKEIHRLNLTIEEMKNSKSTDTKLPGGESTNVPMEQSCQELDAVSDFKQSQESLVESSV
DDKYGKAVQKLNRLKQQRKELMATAEEQQTQITQLNSKVKEMEQDLSRLQDNVQLLQVDL
QSSQKENEKLVAQTQQVEALRRDLEGLRKENESLNASLSALTPQREDESDAKAQMETLLK
QLKETRIQVRQELQSSKESRRRAEAAEQELRELRGQLEQQASAESVKGSQSKDSSLEIKL
KEALRNIDDQAAIMDLAKEEQEELLKKNQELQIEVDLLKGELARVKPGTPAAPDFPSFPS
FTDPSTEAQQDSLLYGNPYAFTDGASEDTVLKCQHCLVAFPGISKEELMEHEESHKVCPI
CTLICDGMEQQEFEDHVYNHDL
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaagcccagaagctgagacgtttcctgtagaaatggaatcaacaacaacctac
tctcaggttgtctttatcgatgttccgcgatcttatccacccaacaccagtgtcacctgt
tgttacactttggcggccggtctgcaaccaaatcccagggattggattgggattttcaaa
gtgggttggaacaccactcaaaactatcacacctttttgtgggtggaaccatgcttggat
cgattaggaccagaccctgtgagacgacaagtagtgtttacggactactaccttcctaag
gatgatggggactaccagttctgctatgtggacagcaacggtcaagtgagaggagccagc
actcccttctgctttgagaacccccaggatcacgccctgtacaccagcctagagaatgat
attttggtcatcacaacacaggagcagacagagcagatggagaaagagagggaagagctc
cgccgggagctgaagcaaatcaaggaggacaaacagaccctgaggaatgagcttgatgaa
aaactgaaagagatccacagactcaatctcaccatcgaagagatgaaaaactcaaagagc
acagatacgaagctgccaggtggcgaaagcacaaatgtgccgatggaacagtcatgccag
gaattagatgctgtgtctgacttcaagcagtcacaagagagccttgtagaatcctctgtt
gatgataaatatggaaaagcagtgcagaaattgaatcggctgaaacagcaacgaaaggag
cttatggcaactgcagaagaacaacaaacacagatcacacagttaaactcaaaggttaaa
gagatggagcaggacctaagcagactacaggataatgttcaactccttcaggtggacctc
cagagcagtcagaaggaaaatgagaagttggttgctcagacacagcaggtggaagcactg
aggagagacttggaaggactgaggaaagagaatgagagtctgaacgccagcctgtccgcc
ctaacaccccagagagaggacgaaagcgatgcgaaggcccaaatggagactttgctcaag
cagctcaaggagaccaggatccaagtgcggcaggagcttcagagttccaaagagtcccgc
agacgtgccgaggcagccgagcaggagctcagggagctcaggggtcagctggagcagcag
gcctctgccgaatctgtgaagggatcccaaagcaaggacagcagtctggagattaagctc
aaggaggcactgaggaatattgatgaccaggcagccatcatggacctggcaaaagaggag
caggaagaacttcttaagaaaaatcaggaactccaaattgaagtggatctgttgaaagga
gagctggcccgagtaaagccaggcactccggctgccccagacttccctagcttcccctct
ttcactgatcccagcactgaggctcaacaggactcgctcctctatgggaatccttatgcc
tttacagacggtgccagtgaggacacggtgctcaagtgccagcactgcctggtagccttc
cctggcatcagtaaggaggagctgatggagcatgaggagagccacaaagtgtgtcccatc
tgcacactcatctgtgacgggatggagcagcaggagtttgaggatcacgtctacaatcat
gacttgtag
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