Alosa sapidissima (American shad): 121700734
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Entry
121700734 CDS
T11137
Name
(RefSeq) LOW QUALITY PROTEIN: protein sidekick-2-like
KO
K16353
protein sidekick
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asad04515
]
121700734
Cell adhesion molecules [BR:
asad04515
]
Immunoglobulin superfamily
Other
121700734
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
FN3_DSCAM-DSCAML_C
Ig_2
Pur_ac_phosph_N
ig
Fn3_VIN3
V-set
Ig_Rha78A_N
Ig_C17orf99
Ig_RIMBP2
Fn3_Dep-1_3rd
Motif
Other DBs
NCBI-GeneID:
121700734
NCBI-ProteinID:
XP_041939869
LinkDB
All DBs
Position
24:18755203..18925138
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AA seq
2172 aa
AA seq
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MYPSCRTHELNVGRLKAMVGYSARLKCRPSWILLLLLFIHYTTAQDDVPPYFKTEPVRSQ
LHLERNRLVLTCMAEGSWPLEFKWIHNTTEITRFSLEYRYLIPSLDRSHAGFYRCIVRNR
VGALLQRRTEVQVAFMGSFEEGERDQAVSQGEGAVIPAPHIRSFPQPQVTWFRDGRKIPP
SSRIAITLDNTLVILSTVAPDAGRYYVQAVNDKNGENKTSQPVTLTVENVGGPADPIAPT
IVVPPRNTSVISGTSEVTMECVANARPLIKLSISWKKDGVPVRNGLSDFNRRLTILTPLV
SDSGYYECEAVLRSSSVPSVSAGAHLHVLEPPQFVKEPEKHITAEMEKVVDIPCQARGVP
PPEIVWYKDAVPISPVKYPRYRVLVGGSLQVNGLLPDDTGMFQCFARNSAGEVQTNTYLA
VTSIAPNITAGPSDSTVIDGMSVILHCETSGAPRPAITWQKGERVLASGSVQLPRFTLLE
SGSLLISPSHISDAGTYTCMASNSRGIDEASADLIVWARTRITNPPQNQSVIKGTKAIMT
CGVTHDSSVTVKFVWEKDGSVINAQSIPRMRLDADGTLHITQTWSGDIGTYTCRVTSVGG
NDSHSAHLRVRSALPAAAHAPENLWANLSTAERRAINLTWVKPFDGNSPLLRYTLEVSEN
NAPWTILLANIEPESTGVTVSGLIPARSYQFRLCAVNDVGKGQFSKETGPCERVSAPRNP
PSAPPQNVIASGRTNQSIMIQWQPPPESHQNGVLRGYSVRYRLTGMPVDIQYKNITNPDV
TNLLLEDLIIWTNYEIEVAAYNRAGLGVYSHKVTEWTLQGVPTIAPGDVQAEAVNSTTIR
FTWTAPNPQFINGINQGYKLLAWEPGQEEEVTLVTVRPNFQDSVHVGYVTGLKKFTEYLT
SALCFTTPGDGPRSPARGVRTHEDTPGAVGHLSFTEILDTSLKVSWREPHEKNGILTGYR
ISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAGMTSKGQGQLSSSTISSGVP
PELPGPPTNMAISNIGPRSVTLQFKPGYDGKTSISRWQVEAQIGVLGENEDWVMVHQLAN
EPDARSMEVPGLNPYTFYRFRMRQVNIVGTSPPSQPSRKIQTLQAPPDIAPANVTLRTAS
ETSLWLRWVPLPEWEYNGNPELVGYRVQYSRTGSAGKPLSHVISDRLEREFTIEDLEEWT
EYEVRVQAINGIGSGPWSQPVRGRTRESVPSCGPTNVSSFATTSSSILVRWSEVPEPDRN
GLILGYKVVYKEKDSDSPLQFWTVEGNTSHSVQLANLGKYVLYEIQVLAFTRIGDGMPSS
PPILERTLDDVPGPPVGILFPEVRTTSVRLIWQSPLQPNGIILAYQITYRLNSSNSNAAT
VDVLNPSTRQYTATGLRPESVYVFRITAQTRKGWGEAAEALVVTTEKRARPQPTSRPMVP
QQQVQARSVLLSWEPGSDGLSPVRYYTVQVRELPDFNWTVHSASVNHESSSYVVDRLKPF
TSYQFRVKATNDIGDSEYSQESEAITTLQDAPDEAPVILSVTPHTTTSVLVRWQPPAEEK
INGILLGFRIRYRELLYDRLRSIAVGNVNSLSASWADFTSPYSIRNLSESSVTQYELDNL
SKHKRYEIRLSVYNAVGEGPTSSPQEVFVGEAVPTAPPQNVAIQSATATQLDVTWDPPPL
ENQNGDIQGYKIYFWEYQRQNETEKLRTLFMPEAGVKLKNLTGYTTYMISVAAFNAAGDG
PRSAATRGRTQQAAPSAPSFIHFSELTTTSVNVSWGEPVFPNGILEGYRLIYEPCTPVDE
SSLACADCLHSPSPSGVSKTVTVDVKGPPYWLKIKDLADGVTYNFRIRARTFTYGPEVEA
NITTGPGEGAPGPPGEPFISRYGTGLTIHWSNGDPGRAPITRYVIEARPSDEGLWDILIK
DIPKEVTSYTFNMDLLKQGVSYDFRVIGVNDYGYGTPSAPSPSISAQKVAPFYEEWWFLV
VVALVGLIFILLLVFILIIRGQSKKYAKKSDSGNSSNCNALTHGEMVRLDESRFPALELS
NRRLSVKNSFCRKNGVYTRSPPRPSPGSLHYSDEDVSTKYNDLIPAESSSLTEKPSEISD
SQVESPEHVTAERKYRDNRECPVLFTGDSLLSSTVTRSTQLSVPEADSLLHSESQQQQHP
KSIQDQQTHQCQ
NT seq
6519 nt
NT seq
+upstream
nt +downstream
nt
atgtacccgtcgtgccggacacacgagcttaacgttgggcgtctgaaggcaatggtcggg
tactcggcgagactgaagtgtcgacccagttggatattactgcttctcctgttcattcac
tacacgacggctcaagatgacgttcccccctacttcaagacagaaccggtgcggagccag
cttcacctggagcggaaccgtctggttctaacctgcatggcggaggggagttggcctctg
gagttcaagtggatccacaacaccacagagattacacggttctccctcgagtacaggtac
ctgattccgtcgctggaccggtctcacgctgggttctaccgctgcatcgtgaggaaccga
gtgggcgcactgctccagaggagaactgaggtgcaggtggcgttcatgggtagctttgag
gagggtgagcgcgaccaggcggtgtcccagggcgagggggccgtgattcccgcaccacac
atccggagttttccacaaccgcaggtcacgtggttccgagacggacgcaagatccccccc
agcagtcgcatagcgatcaccctggacaacacgctggtcatcctctccactgtagcccct
gatgcaggccgctactatgtgcaggccgttaacgacaagaacggagaaaacaagaccagc
cagccggtcaccctgacagtggagaacgtaggtggtccggctgaccccatcgcccccacc
atcgtggtccctcctcggaacaccagcgttatctccgggacctccgaggtcacaatggag
tgtgtggccaatgctaggcctttgataaagttgagcatcagctggaagaaggacggcgtg
ccggtgagaaatggcctgagtgacttcaaccgccgcctgaccatcctgacgcccctggtc
agcgacagcggctactatgagtgtgaggctgtactgaggagcagcagtgtgccgtctgtc
agcgcaggggcccacctgcatgtactggagcctcctcagtttgtgaaggagccggagaag
cacatcactgcagagatggagaaggtggtggatatcccctgccaggcacgaggtgtccct
cctccagagatcgtgtggtacaaggacgcggtgccaattagtccggtgaagtacccccgc
tacagagtgctggtcggaggcagcctgcaggtcaatgggctcctgcccgacgacacaggg
atgttccagtgcttcgcccgcaactcagcgggagaggtgcagaccaacacttacctggcc
gttaccagcattgccccgaacatcacagcagggccatccgacagcacggtgattgacggc
atgtctgtcatactgcactgcgagacatcaggagccccgcgacctgccatcacctggcag
aaaggtgagcgcgtcctggcctccggctcagtgcagcttcctcgcttcacactgctggag
tcggggagtctcctgataagcccgtctcacatctcagacgcaggcacctacacctgcatg
gccagcaactcacgaggcatcgacgaggcgtccgctgacctcatcgtctgggcccgcact
cggatcaccaacccccctcagaaccagagtgtcatcaaaggtacaaaggccatcatgact
tgtggagtgacccacgactccagtgtcactgtcaagtttgtgtgggagaaggacggctcg
gtcattaacgcccaatccatcccgcgcatgcgtctggacgccgacggcaccctgcacatc
acccagacgtggtctggcgacatcggcacctacacctgccgggtcacctctgtggggggc
aacgactcgcacagcgctcacctgagagtcaggtcagcccttcctgcagctgcccatgcc
ccagagaacctgtgggcgaacctgagcacggcggagaggcgagccatcaacctcacctgg
gtcaagcccttcgacgggaacagcccgctcctccgctacacgctggaggtctccgagaac
aatgcgccgtggactatcttgctggctaacattgagccggagtcgaccggcgtgacggtc
agcggtctcattccggcccgctcctaccagttccgcctgtgcgctgtcaacgatgtgggg
aaaggccagttcagcaaggagacgggaccgtgtgagagagtgtccgctcctaggaacccc
cccagcgctccgcctcagaacgtgattgccagcggccgcaccaaccagtccatcatgatc
cagtggcagcctcctccagagagccaccagaacggcgtcctgcgaggctacagcgtccgg
taccgcctgacgggtatgcccgtggacatccaatacaagaacatcaccaacccagatgtg
accaacctgctgctggaggatctcatcatctggaccaactacgagatcgaagtggctgca
tacaaccgtgctggtctgggcgtctatagccacaaggtcaccgagtggaccttgcaagga
gttcctactatcgctcctggtgatgtgcaggccgaggcagtgaactccacgactattcgc
ttcacctggactgcccccaacccccagttcatcaacggcatcaaccagggctacaagctg
ttggcatgggaaccaggtcaggaggaagaggtgaccctggtgacggtgcggcccaacttc
caggacagtgtgcacgtgggctacgtgacgggcctgaagaagttcaccgagtacttgacc
tctgccctctgcttcaccacgcccggtgacggaccccgcagccctgccagaggcgtcagg
acgcacgaggacactcctggtgctgttggtcacctgagcttcacagagatcctggacacc
tccctgaaagtcagctggagggaaccgcacgagaagaacggcatccttactggctaccgt
atctcatgggaggagtacaaccgcaccaacacgcgggtgacccactacttgcctaatgtg
acgctggagtaccgggtaacgggactgaccgcactcaccacctacaccatagaggtcgcc
ggaatgacctccaaaggtcaagggcagctttcctcatcgaccatctcctctggggtaccg
ccagagctgccgggcccccccactaacatggccatatccaacatcggaccgcgctccgtc
actctgcagttcaagcccggttacgacggcaagacctccatctcacgctggcaggtggag
gcccagatcggtgtgttgggtgagaatgaggactgggtgatggtgcaccagctggccaac
gagcccgatgcccgctctatggaggtgcctggactcaacccctacaccttctacaggttc
cggatgcgacaggtgaacattgtgggcaccagcccccccagccagccttccagaaagatc
cagacactgcaggctcccccagacatcgccccggccaatgtcaccctacgcacggccagc
gagaccagcctctggctgagatgggtgcccctgccggagtgggagtataacgggaacccc
gagctggtgggctaccgcgtccagtactcgcgcaccggctccgccggcaagcccctcagc
cacgtcatcagtgaccggctcgagcgcgagttcaccatcgaggacctggaggagtggacc
gagtacgaggtccgcgtgcaggccatcaacggcatcggatccgggccctggagccagccc
gtccgcggcagaaccagggagtccgttccgtcatgtggccccaccaacgtgtcatctttt
gccaccacctccagcagtatcctggtgcgctggtctgaagtccccgaacctgaccgcaat
ggcctcatcctgggatacaaggtggtgtataaggagaaggactcggacagtcccctgcag
ttctggacggttgagggcaacaccagtcacagtgtgcagctggctaacttggggaagtac
gtgctctacgagatccaggtcctggccttcacgcgcatcggggacggcatgcccagctca
ccccccatcctggagcgcaccctggacgatgtgcccggcccaccggtgggcatcctgttc
ccggaggtgaggaccacctcagtgcgactcatctggcagtcccctctgcagcccaacggc
atcatcctggcctatcagatcacgtaccggctcaactcgtccaatagcaacgcggccacg
gtggacgtgctgaacccgagcacgcggcagtacaccgccaccggcctgcggcccgagtcc
gtttacgtgttccggatcacggcccagacccgcaagggctggggagaggccgctgaggcg
ctggtggttaccacggagaagagagctcgaccacagcctaccagccgccccatggtgccg
cagcagcaggtgcaggcgcgcagcgtgctgttgtcgtgggaaccgggcagcgacggactg
tcgcctgtgcgctactacacggtgcaggtgcgcgagctgcccgactttaactggaccgtc
cactctgcatccgtcaaccacgagtccagcagctacgttgtggacagactgaagcccttc
acgtcgtaccagttcagggtgaaggccaccaacgacatcggagacagcgagtacagtcag
gagagtgaggccatcaccacgctacaggatgctccagatgaggcccctgtcatcctctct
gttactccacatacaaccacttctgtgctggtccgctggcagcctcctgctgaggagaag
attaacggcatcctgctgggctttcgtatccgttaccgggagctcctctacgaccggctc
cgcagtatcgctgttggaaatgtcaacagcctctccgccagctgggcagacttcacctcc
ccatacagcatacggaacctgagcgagtcctccgtcacccagtatgagctagacaacctg
agcaagcacaagcgctatgagatccgcctaagtgtgtacaacgctgtgggagaaggcccg
accagctctccccaggaagtgtttgtgggagaagcagttccaacagccccgccccagaat
gttgccatccaatcagcaacagccacacagctagatgtgacatgggacccacctcctctg
gaaaatcagaatggagatatccagggttacaagatctacttctgggagtaccagcgtcag
aacgagacggagaagctgcggacgctgttcatgccggaggctggggtcaagctgaagaac
cttacgggctacaccacctacatgatcagcgtggccgccttcaacgcagccggagatgga
ccacgcagcgccgccaccagagggcgcactcagcaggctgctcccagtgcccccagcttc
atccacttcagcgagctgaccaccacctcagtcaacgtgtcctggggtgaaccagtcttc
cctaatggaatcctcgagggctatcgcctcatctacgagccctgcacgcctgtcgatgag
tcgtcactggcctgtgccgactgtctccactccccctccccctcaggcgtcagtaagaca
gtgacggtggacgtgaagggccccccctactggttgaaaatcaaagacctggccgacgga
gtcacttacaacttccgcatccgcgccaggactttcacctacggtcctgaggtggaggcc
aatatcaccactggccctggggaaggggcccctggaccgcccggagagcccttcatctct
cgctacggcacgggcctcaccatccactggtccaacggcgatcccggacgagcccccatc
acgcgttacgtcatcgaggccaggccctcagatgagggattgtgggatatcttgatcaag
gacatccccaaggaagtgacatcatacacattcaacatggacctcctgaagcagggtgtg
agctatgacttccgggtcatcggagtaaacgactacggatacggcacccctagtgccccc
tccccctccatatcagcccaaaaggtggcgccgttctatgaggagtggtggttcctggta
gtggtggccctggtggggctcatcttcatcctgctgctcgtgttcatcctcatcatcaga
ggccagagcaagaagtacgccaagaagtccgactcaggcaacagctctaactgcaacgcg
ctgacccatggggagatggtgcgtctggacgagagccgcttccccgccctggagcttagc
aaccgccggctgtccgtcaagaactccttctgccgcaagaacggcgtctacaccaggtcc
cctccccggcccagccctggtagtctgcactactcggatgaggacgtgagcaccaagtac
aacgacctgatccccgccgagagcagcagtctcaccgagaagccctccgagatctcagac
tcacaggtggagtcccctgagcatgtgactgctgaaaggaagtaccgtgataaccgcgag
tgccctgtacttttcactggggattctcttctgtcgtctactgtcacacggtcgactcag
ctgtctgtgcccgaagctgattctctgctccactctgagagtcagcagcagcagcacccc
aaatcaattcaggaccagcagacacatcaatgccaatga
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