Alosa sapidissima (American shad): 121702493
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Entry
121702493 CDS
T11137
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asad03021
]
121702493 (aff3)
Transcription machinery [BR:
asad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121702493 (aff3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121702493
NCBI-ProteinID:
XP_041940132
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Position
2:31932086..31968195
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AA seq
1436 aa
AA seq
DB search
MPTVFGNKGKLANVCCMLRHTFQTTGSEPSCGAQDLLGDMTHSWPSQQPPGGGGAERFLH
TSKEAKQCGAQHKQVRGNPPARMTHPHVAPHKCMLADDLKLSSDEDDDDKGHQQTTSWTD
NSRLSGQPQQQQQQQHTHTHSRAHTHTHGGRVRHSSPGSSGSDSSSESDDSTSGGGSQRS
RSPSPEILSQPGTPSASRPLAYAKETANPSDTQWHLDKWLEKVQRKRDSTERDPGRRGAA
ATGRHRSPVSDSERGPSPARSWGQDYSPGQSPAPSPKFDYSPRHSPQASPVYSPCPSPGR
HSPPAPPSPVPSECLSPSPIRTHVPLRSPSPTLPPACPLTSGPGQYPPQPPTQAHQQELQ
IHRPPVQTSSPVHKPRIRPWVPPLQQQQHHPPADPTSNRSRISPSNQLHSHQGSTDTSTS
TTTITSIATKASHKHFAKAKDQGAEVGTNRRPSPAPHSSSCSPRIQGPQAGIRASPGEKV
RAKHSTSTERGHRQSDHKAPSDRSHNSHRSGDPVYQKVSENSHKTASEHSHKANASELSQ
KLSEHSQKFSDHSQRFSDHSQKFSEQTHKSSDRIQKSSNPTHKPNDHNHRPNDHNHKTSD
RNHKLGDPKLSHSYRTEHNPKHPSHPRSVPGSSRSPTAKSKHSSSSSAERSIKTHTSGRT
GSGSRPAPEPASSAHRLAPKHCPSPSVKPEAKGREVPVPLKAASTRGAGREARHRDREQE
VARRGEARPGHHQPHQQQQQQEAVKGRRRLAEEQLLRRRWVQSSEEEEEEEEEEEGGERE
RKRRRRRGEGGGEHNGEWLAVQPKQRPHTNSAHRRHPNHQHPPPNQDEGFAEEPDQRKKT
KRRRESEEESQTHQQDAVGRCSPPPPHSPTPVILSSASSSSSSSSSSSSTSSSSDSEAEL
AAPPVGNVTKVRADSTSRQRAAAKRGRHRGAGRTSGEQQPAVVHPGRPSADVPAEGPQSR
GQHKLYTLVPFGRTEKSSSVSSRGLKNLLVRIDLSLLSRVPSTTAATAAAVAVEDAPQRR
TSSSSSSSSSSAKAKDKAAMRHLYHPEQEPGDSRRKRKAENGVGHRDSKKSHSHSDPPSA
PPPSAASRDHMVPSYHSYRANGYSEDYLDSQKRPLSPLSPLSDTPEPAKASIKAQDSDQY
YPDMTSHKGQMHRTQPKMETECVGVSGHPQGSCETWPSGVNPALRHRGTVPYTDVSQHAE
YYMHEAKRMKHRADAMVEKLGKAVNYVDAALSFMECGKAMEEGPLESKSPYAMYAETVDL
IRYAMRLKNHSGPGATQEDKQLAVLCFRCLALLYWQMFRLKKDHALKYSKALLDYFKSSP
KVPHNPSAGSDSVKGSMLPSPTRAPLGSHAGSSTSPFVTIPQRIHQMAANHLNITNSVLY
SYEYWEVADSLAKENKEFFNYLNNLTGPLTLHSSMAHIVQYTRQGLQWIRISANLS
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgtgttcggaaacaaggggaaacttgcaaacgtttgctgtatgcttcgacac
acatttcagaccacaggaagtgaacccagctgtggtgctcaagaccttctaggggacatg
acccattcctggccttcccagcagccccctgggggaggcggggctgagcgtttcctgcac
acctccaaggaggcgaagcagtgtggcgcacagcacaagcaggttcggggtaaccctccc
gcgaggatgacacacccacatgtggccccacacaagtgcatgctagctgacgacctgaaa
ctcagcagtgatgaggatgacgatgacaagggccaccagcagacaacatcctggactgat
aatagccggttgtccggacagccgcagcagcagcagcagcagcagcacacacacacacac
tcacgcgcacacacacacacacatggcgggagggtgagacattccagcccaggctcgtcc
ggctccgattcctccagcgagtcggacgacagcaccagcggaggcggcagccagcgctca
cgcagccccagcccagagattctctcccagcctgggacacccagcgccagcaggcccctc
gcctacgccaaggagacggccaacccgtccgatacccagtggcatctggacaagtggctg
gagaaggtccagcggaagcgagactccacagaacgcgacccgggcaggagaggagccgcc
gccacaggtcgccacagatcccccgtgtcggactccgagcgcgggccttccccggccaga
tcgtggggacaagactacagcccaggccagagccccgctcccagccccaagttcgactac
agccccaggcacagccctcaggccagcccagtctacagcccgtgccctagtccaggtcgc
cacagcccgcctgctccccccagccctgtgcccagcgagtgtctaagccccagtcccatt
cgcacgcacgtccctctcaggagccccagtccgactctcccccctgcctgtccactgacc
tcggggcctgggcagtatcctccccagcctcccacccaggcccaccagcaggagctccag
attcacaggccccctgttcaaacctccagccctgttcacaagcccaggatccggccctgg
gttccccccctgcagcagcagcaacatcatccaccagctgatcccaccagtaacaggtcc
cggatcagccccagcaaccagctgcattctcatcagggctccaccgacaccagcacctcc
acaaccaccatcacatccattgccaccaaagcctcgcataagcactttgcgaaggctaag
gaccagggtgcggaagtcgggacgaaccgtaggcccagccctgctccacacagcagcagc
tgcagccccaggattcagggtcctcaggccggcatcagagccagtcctggggagaaggtc
agagccaagcattcaacctcgacggagaggggtcacagacagagcgatcacaaagcaccc
agcgacaggagccataacagtcacaggtctggtgatcctgtctaccagaaagtcagtgaa
aatagccacaaaactgccagtgagcatagccacaaagctaatgctagcgagctaagtcag
aaattgagtgaacatagccagaagtttagcgaccatagccaaagatttagcgaccatagc
caaaaatttagcgagcaaacccacaagtctagcgatcgcattcagaaatccagcaaccct
acccacaagcccaacgaccacaatcatagacccaacgaccacaaccacaaaaccagcgat
cgtaatcataagctcggcgatcccaagttaagccacagctacaggaccgaacacaacccc
aaacacccgtcccaccctcgctctgtaccggggtcaagccgcagccccaccgctaaatcc
aagcactcgtcatcgtcctctgcggagcgcagcatcaagacccacactagtggtaggacc
ggttccggctccaggcctgcacctgagcctgcttcctctgcccaccgcttggcacccaag
cattgcccaagccccagcgtcaagccagaggccaagggcagggaggtgccggtgcctctt
aaagcggccagtactagaggcgcagggagggaggccaggcacagggacagggagcaggag
gtggccaggcgtggagaggctcgtccagggcaccaccagccccaccagcagcagcagcag
caggaggctgtgaagggacggaggaggctggcggaggagcagctattgagacgccgctgg
gtccagagctcggaggaggaggaggaggaggaggaggaggaggaaggaggggagcgggag
aggaagaggaggaggaggagaggagaaggaggaggggagcacaacggcgaatggctggcc
gtgcagcccaagcagagaccgcacaccaatagtgcccaccgacgacaccccaatcaccaa
cacccgccgcccaatcaggacgaaggcttcgctgaggagccggaccagaggaagaagacg
aagaggaggagggagagtgaggaagagtcccaaacgcaccaacaggacgccgtcggacgc
tgctctcctccaccgccgcactcgcccactcccgtcatcctgtcctcagcatcttcttcg
tcctcctcatcctcctcttcctcctccacgtcctcttcttcggactcggaagccgagctc
gctgctccgccagtcgggaacgtcaccaaggtccgcgcggactctacgtcgcggcaacgt
gccgcggccaaaagggggcgccaccggggggcaggccgaacctcaggcgagcagcagcct
gccgtggtccaccccggcaggccgagcgccgacgtcccggccgaggggcctcagagtcga
ggccagcataaactctacaccctggttccgttcggacgcaccgagaaaagctcctcggtc
tccagccgcggcctgaagaaccttctggtgaggatcgacctctcgctcctctccagggtt
ccgagcaccacagcagcgacagcagcagcggtggcggtggaggacgctccacagcggaga
acctcctcatcctcatcctcatcttcctcgtctgctaaagccaaagacaaagctgccatg
aggcacctgtaccaccctgagcaggagcccggagacagcaggaggaagcgcaaggctgaa
aatggagttggccacagggacagcaagaagagccactcacacagtgaccccccctcggcc
ccccctcccagcgcagccagccgagaccacatggtcccgtcgtaccacagctacagagcc
aacgggtactcagaggattacctggactctcagaaaaggcctctctcccccctctcccct
ctttcggacactccagagccagccaaggcctccataaaagcccaggacagtgaccagtac
tacccagacatgacaagccataaaggccagatgcacaggacccagcccaagatggagacg
gagtgtgtgggagtgtctggtcaccctcaaggctcctgtgagacctggccctctggggtc
aacccagccctccgccacagaggaactgtgccctatactgatgtctctcagcatgctgaa
tactacatgcatgaggccaagaggatgaagcacagagctgatgccatggtggaaaagctg
ggcaaggcagtgaactatgtggacgctgcgctgtctttcatggagtgtggcaaagccatg
gaggaaggaccactagagtccaagtctccttatgccatgtacgctgagacagtggatctc
atacggtatgccatgaggttgaagaaccactctggcccaggtgcaactcaggaggacaag
cagctggctgtactttgtttccgttgccttgctctcctgtactggcagatgttcagacta
aagaaggaccacgccctgaaatactctaaagctttgctcgactacttcaagagttctccc
aaggtccctcacaacccatccgcaggaagcgattctgtaaagggctctatgcttccctcc
ccaactcgagcccctctgggaagccatgctggcagctccacctccccgttcgtcaccatt
ccccagcgcatccaccagatggcagcaaaccatctcaacatcaccaacagtgtgctgtac
agctacgagtactgggaagtggccgacagcctggccaaggaaaacaaggagttcttcaac
tacctgaacaatctcactggccccttgactcttcacagcagtatggcccacattgttcag
tacactcgccaaggactacagtggatacgcatcagtgctaacctgtcctag
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