Alosa sapidissima (American shad): 121703863
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Entry
121703863 CDS
T11137
Name
(RefSeq) guanylate-binding protein 1-like isoform X1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121703863
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GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
Motif
Other DBs
NCBI-GeneID:
121703863
NCBI-ProteinID:
XP_041940231
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Position
2:complement(43440995..43475874)
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AA seq
640 aa
AA seq
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MMANFMALSMQTPVCLVDNGPDGHMRVQQEALQILEQIQQPVVVVAVVGLYRTGKSYLMN
RLAGKHTGFALGSTIESKTKGVWMWCVPHPSKPGNTLVLLDTEGLGDVDKGDSKHDTQIF
SLAVLLSSTLVYNSRGTIDNRAVEDLQYVTELAEYIKVKSSDKDGEDSEFVKVFPSFIWA
VRDFTLERKIDDEDATEDEYLDFALKLKPGSSKKVNDYNLPRECIRKYFPSRKCFTFPFP
SRPEDVIRLESLSQSEMAPEFLEVTERFCTFIFDQSPVKQLKDGHTVDGRILGHLMKMYV
ETMSSGGVPCLENAVVAMAQIENEAAVKEGLEVYESGMAQLTAYFPVDLCDITAEHQRLN
SLATEVFIKRSFKDDDGKHIKSLEEAVNKLFSRFLQQNEEASVLKCKEVLIGLSAPLRER
LQQGFYMKPGGYQLYRQDMEDIVKKYKSQTHLGVKAEDMLEGLLNQCKEESSAILHADKS
LSARDKQICEQRERAVMLEQEVKANEERQRQLEERMRAEQRSNEERMRQVKEKMEQEMRE
QREEARRATESQLGEQAALLQKGFQEKADRLGQEICEVQRRAEEAQKARSQEFTQLLEQQ
DRRHNEAMAMMRQQNEAILRSQRSQGGGGLLGRIIRTILD
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaaactttatggctctctccatgcagaccccggtgtgtctggttgataacggg
cctgacgggcacatgcgtgtccagcaggaggcgctgcagatcctggagcagatccagcag
ccggtggtggtggtggccgtggtggggctctaccgcacgggcaagtcctacctcatgaac
cggctggccggcaaacacacagggtttgcgctgggcagcaccatcgagtccaaaaccaaa
ggagtctggatgtggtgtgtacctcacccctctaaaccaggaaacacccttgtcctgctg
gacacagagggactgggagatgtagacaagggagactccaagcatgacacacagatcttc
tctctggccgtcctgctaagcagcactctggtttacaacagcagaggaaccatcgacaac
agggctgtggaggacttgcaatatgtaactgagctggctgagtacatcaaagtgaagtca
tctgataaagatggagaagattccgagtttgtgaaggtcttccccagcttcatctgggcc
gtgagggacttcactctggagaggaagatcgacgacgaggatgcgacagaggatgaatac
ttagacttcgccctgaagctgaaacctggcagctctaaaaaggtaaatgactacaacctt
cctcgggaatgcatccggaagtacttcccatcccggaagtgtttcaccttcccattcccc
agccgcccggaggacgtgatccgtctggagagcttgtcccagtcggagatggccccagag
ttcctggaggtcacagagcgcttctgcaccttcatcttcgatcagagccctgtaaagcag
ctaaaggatggacacactgtcgacggcaggatcctggggcacctgatgaagatgtacgtg
gagaccatgtccagcgggggagtgccctgcttggagaatgcagtggttgccatggcgcag
attgagaatgaggctgctgtgaaggagggtctggaggtttacgagagcggcatggcgcag
ctgaccgcctacttccccgtggacctgtgtgacatcaccgccgaacaccagcgcctcaac
agcctggcaacggaggtcttcatcaagcgctccttcaaggatgacgacgggaagcacatt
aagtctctggaggaggctgttaacaagctgttcagtagattccttcagcagaatgaggag
gcctcagtcctgaaatgcaaggaggtcctcataggtctctctgctccactgagggaaaga
ctccagcagggattctacatgaaacccggaggataccagctctaccgccaggacatggag
gacatcgtgaagaaatacaaaagccagacccacctgggagtcaaggctgaagatatgctg
gagggcttactgaaccagtgtaaggaggagtcctcagccatcctgcatgctgacaagagt
ctcagcgccagggacaaacagatctgcgagcagcgtgagagagccgtgatgctggagcag
gaggtgaaggctaacgaggagcgtcagcgtcagctggaggagcgcatgcgtgcggagcag
aggagtaatgaggagcgcatgcgacaggtgaaggaaaagatggagcaggagatgagagag
cagcgggaggaggcacgacgcgccacagagagccagcttggtgagcaggccgccctgctg
cagaagggcttccaggagaaggcggacaggttgggccaggagatctgtgaggtccagcgg
agagccgaggaggcgcagaaggccaggagccaggagttcacccaactgctggagcagcag
gatcggcgccacaacgaggccatggccatgatgcggcagcagaatgaagccatcttaaga
tcacaaagatcacaaggaggagggggtctattgggcaggattatcagaacaatcttggac
tga
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