Alosa sapidissima (American shad): 121703871
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Entry
121703871 CDS
T11137
Name
(RefSeq) guanylate-binding protein 1-like isoform X1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121703871
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GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
Motif
Other DBs
NCBI-GeneID:
121703871
NCBI-ProteinID:
XP_041940237
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Position
2:43501911..43628963
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AA seq
633 aa
AA seq
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MMANFMALSMQTPVCLVDNGPDGHMRVQQEALQILEQIQQPVVVVAVVGLYRTGKSYLMN
RLAGKHTGFALGSTIESKTKGIWMWCVPHPSKPGNTLVLLDTEGLGDVDKGDSKHDTQIF
SLAVLLSSTLVYNSRGTIDNRAVEDLQYVTELAEYIKVKSSDEDGDDSEFVKVFPSFIWA
VRDFTLERKIDDKDATEDEYLDFALKLKPGNSKKVNDHNLPRECIRKYFPSRKCFTFPFP
SRPEDVIRLETLSQSEMAPEFLEVTERFCTFVFNQSPVKQLKDGHTVDGRILGHLMKMYV
ETMSSGGVPCLENAVVAMAQIENEAAVKEGLEVYESGMAQLTAYFPVDLRDITAEHQRLN
SLATEVFIKRSFKDDEGKHIKSLEEAVNKLFSRFLQQNEEASVQKCKKVLTGLSAPLRER
LQQGFYMKPGGYQLYCQDMEDIVKKYKSQTQLGVKAEDVLEEFLKQRKEESSAILQADQS
LSARDKQICEQRERAVMLEQEVKANKERQRQLEERMRAEQRSNEERMRQVKEKMEQEMRE
QREEARRATESQLREQAALLQRGFQEKADQMGRDMRAAQRRAEEAQQAKSQEFTRLLEQQ
DRRHNEAMAMMRQQNQAIQNQRPRGGGGGCCIQ
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaaactttatggctctctccatgcagaccccggtgtgtctggttgataacggg
cctgacgggcacatgcgtgtccagcaggaggcgctgcagatcctggagcagatccagcag
ccggtggtggtggtggccgtggtggggctctaccgcacgggcaagtcctacctcatgaac
cggctggccggcaaacacacagggtttgccctgggcagcaccattgagtccaaaaccaaa
ggaatctggatgtggtgtgtacctcacccctctaaaccaggaaacacccttgtcctgctg
gacacagagggactgggagatgtagacaagggagactccaagcacgacacacagatcttc
tctctggccgtcctgctaagcagcactctggtttacaacagcagagggaccatcgacaac
agggctgtggaggacttgcaatatgtaactgagctggctgaatacatcaaagtgaagtca
tctgatgaagatggagacgattccgagtttgtgaaggtcttccccagcttcatctgggcc
gtgagggacttcactcttgagaggaagatcgacgacaaggatgcgacagaggatgaatac
ttagactttgccctgaagctgaaacctggtaactctaaaaaggtgaatgaccacaacctt
cctcgggaatgcatccggaagtacttcccatcccggaagtgtttcaccttcccatttccc
agccgcccggaggacgtgatccgtctggagaccttgtcccagtcggagatggctccagag
ttcctggaggtcacggagcgcttctgcaccttcgtcttcaatcagagccctgtgaagcag
ctgaaggatggacacactgtcgacggcaggatcctggggcacctgatgaagatgtacgtg
gagaccatgtccagcgggggagtgccctgcttggagaatgcagtggttgccatggcgcag
attgagaatgaggctgctgtgaaggagggtctggaggtttacgagagcggcatggcgcag
ctgaccgcctacttccccgtggacctgcgtgacatcaccgccgaacaccagcgcctcaac
agcctggcaacggaggtcttcatcaagcgctccttcaaggatgacgaggggaagcacatt
aagtctctggaggaggctgttaacaagctgttcagtagattccttcagcagaatgaggag
gcctcggtccagaaatgcaaaaaggtcctcacaggtctctctgctccactgagggaaaga
ctccagcaaggattctacatgaaacctggaggataccagctctactgccaggacatggag
gacatcgtgaagaaatacaaaagccagacccagctgggagtcaaggctgaagatgtgttg
gaggagtttctgaagcagaggaaggaggagtcctcagccatcctgcaagctgaccagagt
ctcagcgccagggacaaacagatctgcgagcagcgtgagagagccgtgatgctggagcag
gaggtgaaggctaacaaggagcgtcagcgtcagctggaggagcgcatgcgtgcggagcag
aggagtaatgaggagcgcatgcgacaggtgaaggaaaagatggagcaggagatgagagag
cagcgggaggaggcacgacgcgccacagagagccagctccgtgagcaggccgccctgctg
cagaggggcttccaggagaaggcggatcagatgggccgtgacatgcgagcggcccagcgg
agagccgaggaggcgcagcaggccaagagccaggagttcacccgcctgctggagcagcag
gaccggcgccacaacgaggccatggccatgatgaggcagcagaatcaggccatccagaac
cagagaccaagaggaggaggaggaggctgctgcatccagtaa
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