Alosa sapidissima (American shad): 121704104
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Entry
121704104 CDS
T11137
Symbol
ccnt2a
Name
(RefSeq) cyclin-T2a isoform X1
KO
K15188
cyclin T
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121704104 (ccnt2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asad03021
]
121704104 (ccnt2a)
Transcription machinery [BR:
asad03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Super elongation complex (SEC)
121704104 (ccnt2a)
Brd4/P-TEFb complex
121704104 (ccnt2a)
7SK RNP complex
121704104 (ccnt2a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CycT2-like_C
Cyclin_N
BUR2_N
Motif
Other DBs
NCBI-GeneID:
121704104
NCBI-ProteinID:
XP_041940658
LinkDB
All DBs
Position
2
Genome browser
AA seq
706 aa
AA seq
DB search
MAAYRGSSSKWFFTREQLESTPSRRCGVEPDRELSYRQQAANLIQDMGQRLNVSQLTINT
AIVYMHRFYMYHSFTKFHRNIISPTTLFLAAKVEEQPRKLEHVIKVAHACLCPQEPPLDT
KSNAYLQQAQELVILETIVLQTLGFEITIEHPHTDVVKCSQLVREANSHPPLSSSATASK
DLAQTSYFMATNSLHLTTFCLQHKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVDSS
VTLELLDELTHEFLQILEKTPSRLKRIRNWRATQAAKKPKADGQVTDGSGTFTCPSLSQD
HSLVDAIPGVSGDVAFSKASFPVGLSGNSGGLSLDALTGVGGTAYTYTAPSDWPQDQGHS
DPLKPDTLGLQQGAAPLLPQHGPSSSHPHRPDKGAEFNPIKHEHKAGGGAKHQPPVFPAP
APPPPPTVKMTLDKYREKQAAELAGQKRRHEQQQQSLEQEGRDAYSSAALQTDHRKHLQA
HLHSQLPGPGSSSLSTASPLKMKLPLPGQERSQSGGNNGGGDRREKGASLKLRLPIPAPG
ERSGSGSKEELKMKIKVSSERHSSSDEGAAKSKHSSPLVVKEKHRDREHSGHRHHHKHGH
SHFHVHSGNGRGAHEGSGSGGALLRSPLGLAADGLTMMAPSASATATSASSSSSSSSRKR
GYPESSHNHHSSKKNKSSKGSSAGGLRTSQQHPGDMGQEAGGEPRA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtaccggggatcttcgtcgaaatggttcttcacccgggaacagctcgaaagc
acgccgtctcgacgctgtggagtagaaccggacagggaactctcttatcgacagcaagcg
gcaaaccttattcaagatatgggccagagactaaatgtctcccaactgacaataaatact
gctattgtttacatgcataggttttatatgtaccactctttcacaaaattccatagaaat
atcatatcccctaccaccttattcctggctgccaaagttgaggagcagccgcggaaactt
gagcatgtcattaaagtggcgcatgcctgtttatgccctcaagagcctcctctggataca
aagagtaatgcatacctccagcaagctcaagagctggtgatacttgaaaccatagtgctg
cagactttaggttttgaaataacaattgagcatccacacactgatgttgtgaaatgttcc
caactagtgcgagaagctaattctcatccccctctctcttcttctgccacagcaagcaag
gatctggcacagacttcctatttcatggctaccaacagcctccacctcaccaccttctgt
ctgcagcacaagcctacggtcattgcatgcgtgtgcatacacctcgcttgcaaatggtcc
aactgggagatcccagtgtccaccgatgggaagcactggtgggaatatgtggacagctca
gtcaccctggagcttttggatgaactgacccatgaattcctccagattttggagaagaca
ccgagcaggctaaagaggattcgtaactggagggcgacgcaagctgccaaaaagcccaaa
gcagacggccaggtgaccgacggcagcggcactttcacgtgtccatccctgtcgcaggat
cattccctggttgatgccattcctggcgtgtctggagacgtggccttctccaaggcctcg
tttcctgtcggcctgtcgggcaactccgggggcctctccctagatgctctcaccggcgtg
gggggcactgcctacacgtacacggccccgagcgactggcctcaggaccagggccactcg
gaccctctaaaaccggacaccctgggtctccagcagggggcagcaccgttgctgccccag
cacggcccctcctcctcgcacccgcaccgacccgacaagggtgccgagttcaaccccatc
aaacacgaacacaaggccggcggaggggccaaacaccagccgccggtctttcccgcaccc
gcacctccaccacctcccaccgtcaagatgactctggacaagtaccgcgagaagcaggcg
gccgagctggctgggcagaagcgccggcatgagcagcagcagcagagcttggagcaggaa
ggtcgggacgcgtacagtagcgccgccctgcagactgaccaccgcaagcatctgcaggcc
cacctgcacagccagctgccgggtcccggcagcagtagcctgtccaccgcgtcccctctg
aagatgaagctgcccctccctggccaggagaggtctcagagtggcggcaacaacggcgga
ggggaccggcgtgaaaaaggcgcctcgctgaagctgcgcctcccgatccctgccccgggc
gagaggagtggctcaggcagcaaggaggagctcaagatgaagatcaaagtgtcgtcggag
cggcacagctcctcggacgagggtgctgccaagagcaaacattccagcccgctggtggtc
aaggagaaacaccgggaccgggagcactcgggccaccggcaccaccacaagcatgggcac
tcgcatttccacgtgcacagcggcaacggccgaggggcccacgagggctcagggtccgga
ggcgccctcctccgcagccccctgggcctcgccgccgacgggttgaccatgatggccccc
agcgcctcagccactgccacctcagcgtcctccagttcctcctcctcctcgcgcaagagg
ggctaccccgagagcagccacaaccaccactcctccaaaaagaacaaaagctccaagggc
agctcagctggaggcctgcggacgtcccagcagcaccctggcgacatgggacaggaagcc
ggcggggagccgcgggcctga
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integrated database retrieval system
