Alosa sapidissima (American shad): 121704525
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Entry
121704525 CDS
T11137
Symbol
ppl
Name
(RefSeq) periplakin isoform X1
KO
K10386
periplakin
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121704525 (ppl)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121704525 (ppl)
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
121704525 (ppl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
121704525
NCBI-ProteinID:
XP_041940738
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Position
3:complement(6061772..6079097)
Genome browser
AA seq
1756 aa
AA seq
DB search
MFKKKTAKSATITQKSSTKPASELTSLIEKLQKNADKVEKNILETEQNLNRDVAKINEGK
QPLYQEDTNKRILNSLELLKALDDDAAAAVRLQHPQAEMIEQDMKQLRDRVMRLREDHDK
IYHQTRGEGVPMVNWGNIVDEKLSNLNNKGFGQDLPSIEKDVEEHNIFQSEVEALAPYVT
ESDDKDYVGGLQMKYNKLLANSTARQKHLLSLRDYMQRCTNELYWMDQQAEERIGYDWSD
TNLDYPARKRQYENFIGKCLESKEATITKLNDDGEKLIAQQHPAKNVIEAHMEAVHADWK
EYLNLLICEENHLKHMDEYHKFQKEARDTQDLLKRLDTDINQKYNPEFKDMFQMEGLISD
LDDQAKALDHFDDRMKALQRRSLQVLPLKYRREPPSKLLPVEALCEFDSEKGQIARDERY
TLLRNNGNKWDVKDQSGHTLTAPGACFFIPPTDPESVTIADNLLNQQANIKKKVATSKGT
LQTRLGELRKESPAVRDKEEQQCRQLMAGLDKVVNDLDKQEKAINARVRPPLEQTRPLQD
SADRLQEMRDITNAVRKIEPEKVSKTKAAESFLHSNPKCASAPLLYSKVDEADKKYNKVD
LLLKLSDEKLQNSNRLENSLQKGKNLLSTYENKLAREEVAPADSSSLDRTLRELADMGSE
LKAKKGVVTEAEENLRAARNSCDNMAAKLQEHCPDIERQEQEVNKLNKRYDNLNRQIDSR
SQSLQKGKMAYNNYRNDYDSLNNWLSRVPNYEPRDTDDKAQIDSKLKNQRNLLSDITRKE
SDLNNVSKNAQLYQQAVKDYENESEKFKSILDLEDGLVPQTYKRSRLESPAQRVKGEEAA
IDSKFTEVHAINKQRLQNLEFTQSLLNQQPEVPIITQSVQTVNASAPGQEPWRVKKQLDE
ETQRREQLEREIQTIQSDIYVLEGQKPQDTIVKKELIKKLPDPQLDEDIHKVQQRLSDER
RTTRLLESELDTLRLKLRGLETEVKEGAQQYTVKEVLRIERDRGQEEEVRKVKEELEELR
RQRTFKDNEIIQIKKQVNILSEEKNKEQEIITEEEVIKVQNDPRLESEYRDLLTRKQKEI
DGRAQLEDELKFLQEKLKRLEKEKAMAEEKISIREVLKVEKDMALEREVDNLRNQYEDER
AKHRSSQREKVDLERKISSLETEKSKVIIQEKMKEIVRPDPKAEAEVGTLRMELVEQQRR
YKDTELQLKTLQDELTMLRNRGPQVEVREMIKEVIKYKTDPETERELERLRNEIVDKTHV
IERSEVEILRTNNDIMRWKDTKPQVQTKEVIKEILQYREDPQTKEEIETLKRKLAEEQKK
RLDLEQQRSKNEEKIRIKKMDLSQVREKIVQQEVVKVEEDQLLRSECDDFVKTISNEQRQ
KESLKDELARLQRQKADLDLQLEEIERERRARRDAELEIQRLRIRLNELEIRDKENREKV
TVKQKVVLQQDPQQEKEHSILRLQVEEERHKRTMLERELNVLLEQQSSLEKMEVKERVVR
SEKIQVEKDPEAEVEIERLKKSLEDENKRRRELDQEINELNSRLQTMEFTNTKSTKELDY
IRDESNRLQQENQRLTNEIRKLQSEIQITSKETKHITESMPLENGKNLELRLTSLQKELS
DLRRITTDKDVEIEKLQKSLSAMRVKREQRESHLRRSIVVIDPDTGKEMRPEEAYKLGLI
DWKMFVNLQSQECDWEEITVKGPSGESSVLHDRKSGKKFSIEEALKAGHITNRQLQQYLN
KEISIQEFGVMVSGKK
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaaaaagaccgccaaaagcgctaccattacgcagaaaagcagcaccaagcct
gccagtgagttgacatcgctcattgagaaacttcagaagaatgcagacaaagtggagaag
aacattctggaaactgagcagaaccttaaccgagatgtggccaaaatcaacgagggcaag
cagccactctaccaggaggacaccaacaagcgcatcctgaactcgctggaactgctcaag
gctctggacgatgatgcagctgccgctgtacgccttcaacacccccaggctgagatgatc
gagcaggacatgaagcagctccgtgaccgcgtcatgagactcagagaggaccacgacaag
atctaccaccagacgcgaggagagggtgtgcctatggtcaactggggcaatattgtggat
gagaaactgtcaaatcttaacaacaaaggattcggacaggacctgccctccattgagaaa
gatgtggaggagcacaacatctttcagagcgaggtcgaggccctggcaccttacgtcact
gaaagcgatgataaggattatgtgggaggactccagatgaagtacaataaactgctggcc
aactccactgcccggcagaagcacctgctttccctgcgtgactacatgcagcgctgcacc
aacgagctctactggatggaccagcaggccgaggagagaatcggctacgactggagtgac
accaacctggactaccctgcccgcaagaggcagtatgagaacttcatcggcaagtgcctg
gagagcaaggaggccaccatcactaaactgaatgatgacggggagaaactcatcgctcag
caacatccagcaaagaacgtcattgaggctcatatggaggctgtccacgctgactggaag
gagtacctcaacctgctcatctgtgaggagaaccacctgaagcacatggatgagtaccac
aagttccagaaagaggcgagagacacccaggacttgttgaaaaggctggataccgacatc
aaccaaaaatacaaccctgaattcaaggacatgttccagatggaagggcttatcagtgac
ttggatgaccaggcgaaggccttggatcactttgatgatcgcatgaaagccctccagagg
cggagtctgcaggtgctgcctctcaagtaccgccgtgagcctccgtccaagctcctcccc
gttgaggctctgtgtgaatttgactccgaaaagggccagattgcgcgcgacgagaggtac
accctgctcaggaacaacgggaataagtgggatgtgaaggaccagtctggccacacgctg
acagctcccggagcctgcttctttataccccctactgacccagaatctgtcaccatcgcc
gacaacctcctcaaccagcaggcgaacatcaagaagaaggtggccaccagcaagggcact
ctgcaaacccgactgggtgagctgaggaaggagagtccagcagtacgtgataaggaagaa
cagcaatgtcgccagctgatggccgggctggacaaggtggtcaatgatctggacaagcaa
gagaaggccatcaatgctcgagtgcgcccccctctggaacaaacccgtccactgcaggac
agtgcagaccgacttcaggagatgagggatattacaaatgctgtcaggaaaattgagcct
gagaaggtctccaagaccaaagcggcagagtccttcctgcactccaaccctaagtgtgcc
agtgccccactgctttactcaaaggtggacgaggctgataagaaatacaacaaagtagac
cttctgctcaagctctctgatgagaagcttcagaactccaaccgcctggagaactctctt
cagaaaggaaagaaccttctctccacctatgaaaacaagttggccagagaggaggttgca
cctgcagactccagctctctggacagaaccctgcgtgagctagctgatatgggatcagaa
ctaaaagccaagaaaggggttgtcacagaggccgaggaaaacctcagagctgccaggaac
agctgtgacaacatggccgctaagctccaggagcactgccctgatatcgagaggcaggag
caagaggtcaacaagctcaacaagcgctatgacaacctgaacagacagattgactccagg
tcacagagcctgcagaaaggtaaaatggcatataacaactaccgcaatgattatgacagt
ctcaataactggctgtcaagggtgccaaactatgagccacgtgacactgatgataaggct
caaatagattccaagctgaaaaaccaaaggaacctgctttctgatataacaaggaaggag
tctgatctcaacaatgtctctaaaaatgcacagctttatcagcaagcagtgaaggactac
gagaatgaaagtgagaagttcaaatccattcttgaccttgaggatggtcttgttcctcag
acctacaagagaagcagacttgagtcccctgcacaaagagtgaaaggagaggaagctgct
attgactccaaatttactgaagtgcatgcaataaacaagcagaggttgcagaatcttgag
tttactcagagtctcctgaatcagcaaccggaggttccaatcatcacacaatctgtccag
actgtgaatgcttcagccccaggacaagaaccttggagagtcaagaagcagctggatgag
gaaactcagcgacgtgagcaacttgagagagagatccagactatccagagcgacatctat
gttctcgagggccagaagcctcaggacaccattgtgaagaaggaactcatcaagaagttg
ccagacccacagctggacgaagacatccacaaggtccagcagaggctgtccgatgagcgc
aggaccactcgcctcctggaaagcgagttggacaccctccgtctgaaactacgcggcctg
gagacagaggtgaaggaaggcgcgcagcagtacactgtcaaagaggttcttcgcattgag
agggaccgcgggcaggaagaggaggtgaggaaggtgaaggaggaactggaggagctgagg
aggcagaggactttcaaagacaacgaaatcattcagatcaagaagcaggtcaacatccta
tcagaagagaagaacaaggagcaagaaatcatcaccgaagaagaggtgatcaaggtgcaa
aatgacccccggctcgagagtgaatacagagatctcttaacgaggaagcaaaaggaaatt
gatggaagagctcaactggaggatgagctcaagttcttacaggagaagctgaagaggctt
gagaaggaaaaggccatggctgaggagaagatctccatcagagaagtcctgaaagttgaa
aaagacatggccttggaaagggaggtggataatctcagaaatcagtatgaagacgagagg
gctaaacataggtcatctcagagggagaaagttgatcttgaaaggaaaatctcaagtctt
gagaccgagaagtcaaaggtcatcatccaagagaagatgaaggagattgtccggcctgac
cccaaagcagaggctgaggttggcacgctccgtatggaactggtggagcagcagaggaga
tacaaagataccgagctccaactgaaaactctgcaggatgagctcaccatgctgagaaat
aggggccctcaggttgaggtcagagaaatgatcaaagaagtcatcaaatacaagacagat
cctgaaactgagagagagctggaaagactacgtaatgagatagtggataaaactcacgtg
atagagaggtccgaggtagaaatcctcagaactaacaatgacattatgagatggaaagat
accaaaccccaggtgcagaccaaagaagtgatcaaagagattcttcagtaccgtgaggat
ccccaaaccaaggaggagattgagaccctgaagagaaaactcgctgaggaacagaagaaa
cgtctagacctggaacaacagagatcaaagaatgaggaaaagatccgtattaagaagatg
gacctttctcaagtgagagaaaaaattgtccaacaggaagttgttaaggtcgaagaggac
cagctcctgaggtcagagtgtgatgactttgtcaagaccatcagcaatgagcagagacag
aaggagagtctgaaagatgagcttgcaaggcttcagcggcagaaggcagacctggatctt
cagcttgaagagattgaacgtgagcgcagagctcgacgagacgcagagctggaaatccag
cgcttgagaattcgtcttaatgaactggagatcagagacaaagaaaaccgtgaaaaggtg
acggtgaaacagaaggtggtgctacagcaagatcctcagcaagaaaaggaacactccatt
ctcaggttgcaggttgaagaggagcgacacaaacgcacaatgctggaaagagagcttaat
gtcttgttggaacaacagtcatcacttgaaaagatggaggtgaaagaaagagtggtgcgc
tctgaaaagatccaggtcgagaaagatcccgaggcggaagtggaaattgagagactcaag
aaaagtcttgaagatgagaacaaacgccgacgcgagcttgaccaggaaatcaatgagctc
aactctaggctgcaaacaatggagttcacaaacacaaagtcgaccaaagagcttgattac
atccgcgacgaaagcaacagattgcagcaggagaaccagcgcctcacaaacgaaatcagg
aagcttcagtcagagattcagattaccagcaaagagaccaaacacatcacagagtccatg
ccgttggagaatggcaaaaaccttgagctgcgtctcacgtcacttcagaaagagctctcg
gacctcagacgcataacaacagataaagatgtggagatcgagaaactccagaagagcttg
tctgcgatgagagtgaagagggaacagcgggaaagccacctgagacggtccatcgtcgtc
atcgatccagacacgggcaaagagatgaggccagaggaggcttacaaactcggactgatt
gactggaaaatgtttgtcaacctgcagagccaggagtgcgattgggaggaaatcacagtc
aagggtccaagcggggagtcttcagttctgcatgacaggaagtctggcaagaagttctcg
atcgaagaggccctgaaggccgggcacattacaaatcgtcagttacagcagtacctaaac
aaagagataagcatccaggagtttggtgtgatggtgtcgggcaaaaagtaa
DBGET
integrated database retrieval system
