Alosa sapidissima (American shad): 121704557
Help
Entry
121704557 CDS
T11137
Symbol
hrob
Name
(RefSeq) homologous recombination OB-fold protein
KO
K27803
homologous recombination OB-fold protein
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asad03400
]
121704557 (hrob)
DNA repair and recombination proteins [BR:
asad03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121704557 (hrob)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HROB
Motif
Other DBs
NCBI-GeneID:
121704557
NCBI-ProteinID:
XP_041940809
LinkDB
All DBs
Position
3:27024331..27033384
Genome browser
AA seq
602 aa
AA seq
DB search
MACKWNGLFSVGEEFDDEDLLQADWTVPTAPATALQPIDVQGTSTSNTSKQAIPATTITI
PNESDLGKQATHNVPGQTSVLGLRGFSASKLPSTSGAGTSASISDMRNSIQSTGPTHQNT
FTPASGACPLDDFDDWDVDLTDLDENVPHVGQPAPVTSLVPPTAISNWPCEDSISPAKRM
RPSACANGLTPPGPSLRGFSIVAHTPEPLGRAPIPRDSFATPRPSPGPFRNPAALPAPPR
SPVIPRMASSFPSPVAPRLWRPQTPGQTGSAMGQPAGHVRGGLFQAVSPTPTPRPLHTPV
LTNHLVQLVSASKKTPQRPRTDPSRPKTRRFPGPAGMLPQQLSGKSLDDIVVAVPQTPAH
SAVARLRSEVPSSQPPDEEDFNGGAWAAMKAEMGLDEKNPSCFLHSYSVVMVLRKAALKQ
LNKNKVPNMAVVLKSILHTHADAKAVFKDPTGEMQGTVHRRLLEDRQAELKTGAVLLLKQ
VGVFSPSHRNHYLNVTPNNLLRIYPPDGSLQPCTLLSQHALGPAEMWGEDSRTVGGPVSQ
MELRFEDEEDEEQLGQKDSRVQEGLPQAAVHNNGPLLTNEGAWDTDGLDELLGELPVETY
SV
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcaagtggaatggtcttttcagcgtgggagaggaattcgacgacgaggacttg
ctgcaagcagactggacagtgcccactgccccagccaccgccctacagcccatagatgtt
caagggacctctacgtcaaatacctcaaagcaagccatccccgccacaaccattaccatt
ccaaatgaatctgacctggggaaacaagctactcataatgtccctgggcagacctcagtt
ttggggcttaggggtttttcagcatctaagcttccctccacctcaggtgctggaacctct
gccagtatatctgacatgagaaacagcatccaaagtactggacctactcaccagaacacc
ttcacacctgcttcaggtgcctgcccactggatgactttgatgactgggacgtggatctt
acggacctggatgaaaacgtccctcatgttgggcagcctgctccagtgactagcttagtc
cctccaacggctatctctaactggccctgcgaggattccatatctccagcgaagaggatg
cgcccttcagcctgtgccaacggcttaactccccctggtcccagtttgagaggcttcagc
attgttgcccacacgcctgagcctcttggaagagccccaatccccagagactcttttgct
acccctcggccatctccaggccctttccgaaacccagctgccctccctgcccctccacgt
agtccggttattccaaggatggcgagcagctttcccagccctgtggcgcctagactgtgg
aggcctcagactccagggcagacgggcagtgccatgggccagcctgccgggcacgtcagg
ggggggctgtttcaggccgtgtccccaacgcccacccctcgccccctccacacaccggtc
ctgaccaatcatctggtccagctggtgtctgcctccaagaagacgcctcagaggccacgc
actgacccgtcccggcccaaaacccgacgcttccctggacctgctgggatgcttcctcag
cagttgagtggcaaaagtctggatgacattgttgtggcagttccacagactcccgcccat
agtgctgttgctcgactcaggagtgaggtccccagctcgcagccgcccgatgaagaggac
ttcaatggtggcgcgtgggccgccatgaaagctgagatgggattggatgagaagaacccc
tcctgcttcctgcactcctacagcgttgtcatggtgctccgcaaggctgcacttaaacag
ctaaacaagaataaagttcccaacatggctgttgtactgaagagtattctacacacacat
gctgatgccaaggctgtttttaaagacccaacaggtgaaatgcaggggactgtgcaccgc
cgacttctagaggatcgacaggcagagctcaaaaccggagcagtgctgttgctcaaacaa
gtgggtgtgttctccccctcccatcggaaccactacctgaatgtcacgcccaacaacctg
ctccggatctacccgccagacggaagcctccagccctgcacactgctgtcccagcatgcc
ctggggccagcagagatgtggggtgaggactcaaggacagtaggaggtcctgtgtctcag
atggagctccgctttgaggacgaggaggacgaggagcagttgggacagaaggacagtaga
gtgcaggaaggccttcctcaagctgctgtccacaacaatggaccattgctgaccaatgag
ggtgcatgggacacagatggcttggatgagttacttggagagttgccagtggagacctac
tctgtgtga
DBGET
integrated database retrieval system
