Alosa sapidissima (American shad): 121704588
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Entry
121704588 CDS
T11137
Name
(RefSeq) cysteine protease ATG4D-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04136
Autophagy - other
asad04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121704588
04136 Autophagy - other
121704588
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
asad01002
]
121704588
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121704588
03029 Mitochondrial biogenesis [BR:
asad03029
]
121704588
Peptidases and inhibitors [BR:
asad01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
121704588
Membrane trafficking [BR:
asad04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
121704588
Mitochondrial biogenesis [BR:
asad03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121704588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
121704588
NCBI-ProteinID:
XP_041940860
LinkDB
All DBs
Position
3:19452170..19458398
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AA seq
464 aa
AA seq
DB search
MNPVRPGDSPAQSHASLLSSPGSMGSAGARDDSGEPEDRVKIKSKLVSAWNSVKYGWTFK
SKSRFNKRSPVVLLGQPYLLSYSGNREAFRRAFSSLFWLTYRKSFPQLAGSTLTSDCGWG
CMLRSGQMLLAQGLVLHLLPQGWTWSASHHTTKDDLEVLPSQPFSSTSVAAVEAPRVRRK
SLGCSLLEGGGSGSEATHRLVVSWFVDQPEQPFGLHQLVEMGKSLGKQAGDWYGPATAAH
IIRKAVAASDLSDLVVYVAQDCTVFKGDIVRLCERPQPEGPRGRGGPWRSLILMVPVRLG
GDALNPAYTESVKRLLRLECCIGIIGGRPKHSLYFVGFQDEQLVYLDPHYSQSTVDISQE
DFPLESFHCKAARKMAFSRMDPSCAVGFYARGQQDFETLCVLVSAALNAEKDKYPMFTFV
EGQRVEEGDDGQSEKSFFSDVCIFSQRKSSSTSQSSSTDEFVLL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgtgaggcctggtgactctcctgcccagagtcatgcctctcttctctcctct
cccggctccatgggctcagcgggggccagggacgactcgggggagccagaggaccgggtc
aagatcaagagcaaacttgtgtctgcctggaatagtgtcaaatatggctggacttttaag
tcaaaatcccgcttcaataagaggtcgcctgtggtccttctgggacagccttacttgctg
agctactctggaaacagggaggcattccgccgagccttttcctctctgttttggctgacc
tatcgtaaaagcttccctcagctggctggctccacactgaccagtgactgtggctggggc
tgcatgctgcgcagtggacagatgctactggcccaggggctcgtccttcacctgctccca
caaggatggacttggtctgcctcacatcatactactaaagatgacctggaggtcttgccg
tcccagcctttctctagcacaagcgtggccgcagtagaagcccccagagtccggcggaaa
agtctgggctgcagtctgctggaggggggcggcagtgggagcgaggcgacccacaggctt
gtggtgtcctggttcgttgaccagccagagcagccttttggcctgcaccagctggtggag
atgggcaagagcttggggaagcaggccggggactggtacggtcctgccactgccgcccac
atcattcggaaggcagtagcagcatctgatttatctgatctggtggtgtatgtggcccag
gactgcactgtgttcaaaggggacattgtgcgactgtgcgagcggccccagccggaaggc
cccaggggccgtgggggcccgtggaggtccctcatcctcatggtgcctgttcggctcggg
ggcgacgccctcaacccagcctacacagagtctgtcaaaagacttctcaggttagagtgt
tgcattggaatcatcggtggcaggcccaaacactcactctattttgttggcttccaagat
gagcagctggtgtacttagaccctcactacagccagtccacagtggacatcagccaagaa
gacttcccgttagagtcgtttcactgtaaggcggctcggaagatggccttcagccgcatg
gaccccagctgtgctgtaggcttctatgccagaggccagcaggacttcgagacactgtgt
gtgctggtcagtgcggcactaaacgcagagaaagacaaatacccgatgttcacctttgtg
gaaggccaacgggtggaagagggggacgatggacagagtgaaaagtcttttttctctgat
gtctgtatcttcagccaacgcaagtcaagcagcacgagccagtcaagtagcaccgatgag
tttgtgttattatga
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