KEGG   Alosa sapidissima (American shad): 121704592
Entry
121704592         CDS       T11137                                 
Symbol
si:dkey-16l2.16
Name
(RefSeq) ras-related protein Rab-35
  KO
K07876  Ras-related protein Rab-35
Organism
asad  Alosa sapidissima (American shad)
Pathway
asad04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:asad00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    121704592 (si:dkey-16l2.16)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:asad04131]
    121704592 (si:dkey-16l2.16)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:asad04147]
    121704592 (si:dkey-16l2.16)
   04031 GTP-binding proteins [BR:asad04031]
    121704592 (si:dkey-16l2.16)
Membrane trafficking [BR:asad04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    121704592 (si:dkey-16l2.16)
Exosome [BR:asad04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121704592 (si:dkey-16l2.16)
  Exosomal proteins of other body fluids (saliva and urine)
   121704592 (si:dkey-16l2.16)
  Exosomal proteins of colorectal cancer cells
   121704592 (si:dkey-16l2.16)
GTP-binding proteins [BR:asad04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    121704592 (si:dkey-16l2.16)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 FeoB_N RsgA_GTPase Gtr1_RagA PduV-EutP SRPRB ORC_WH_C TniB Dioxygenase_N AAA_29
Other DBs
NCBI-GeneID: 121704592
NCBI-ProteinID: XP_041940871
LinkDB
Position
3:24394546..24401102
AA seq 209 aa
MAGKDYHHLFKLLIIGDSNVGKSSLLLRFADNSFSGSYITTIGVDFKIRTVEIDGERVKL
QIWDTAGQERFRTITSTYYRNTHGVIIVYDVTNPESFVNVKRWLNEISQNCDNVCKIMVG
NKNDDPSKKQVESSDALRFGESVGVRVFETSAKENINVEEMFMAFTHMVLRAKKQSQSRA
EREREREKDTVNINSHRDRERRKRGKKCC
NT seq 630 nt   +upstreamnt  +downstreamnt
atggctgggaaggactatcatcatctcttcaaactgctcatcattggagactcaaatgtg
gggaagagcagtctgcttttgcggtttgcggacaactccttctcgggcagctacatcact
acgattggagtggactttaagatccgcaccgtagaaattgacggggaacgtgtcaagtta
cagatctgggatacagctggacaagaacgatttcggaccatcacctccacgtattacagg
aacacccatggcgttattattgtgtatgacgtcacaaatccagagtcgtttgtaaatgtc
aagaggtggctgaacgagatctcccaaaactgtgataatgtttgcaagatcatggttggg
aacaagaatgatgacccctccaagaagcaagtggaaagcagtgatgctctacgctttggc
gagtctgtgggggtcagggtgtttgaaacaagtgccaaggagaacattaacgtcgaggag
atgttcatggcgttcactcacatggtcctgcgggccaagaagcagagccagagccgggcg
gagcgcgaacgtgagcgagagaaggacacggtcaacatcaactcccaccgggaccgagag
agacggaagagagggaagaagtgctgctga

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