Alosa sapidissima (American shad): 121704672
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Entry
121704672 CDS
T11137
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04514
Cell adhesion molecule (CAM) interaction
asad04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121704672 (lrrc4ba)
04517 IgSF CAM signaling
121704672 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
asad04515
]
121704672 (lrrc4ba)
Cell adhesion molecules [BR:
asad04515
]
Immunoglobulin superfamily
NGL family
121704672 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
Ig_2
LRRNT
LRR_NXF1-5
LRR_At5g56370
VEGFR1-3_N_Ig-like
LRR_RPS2
POR_N
Ig_6
DUF4307
Motif
Other DBs
NCBI-GeneID:
121704672
NCBI-ProteinID:
XP_041941030
LinkDB
All DBs
Position
3
Genome browser
AA seq
763 aa
AA seq
DB search
MRITTVTGLSSPSPLLLLAQLLLWLLPFRTDTVGAASTNCPTPCQCSNQASRVICTRRNL
ADVPDSISVNTRYLNLQENSIKVIKSETFKNLRHLEILQLSKNQISQIEVGAFNGLPNLN
TLELFDNKLTQVPSAAFEYLSKLRELWLRNNPIETLPAYVFNRVPSLRRLDLGELKKLEH
ISEAAFVGLDNLRYLNLGMCGLKDIPNLTPLGRLEELELSGNRLEIVRPGSFQGLVSLRK
LWLMHSQMSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLPKLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPGLRGRYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSMTSVNWFMPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGPYTCV
VSNTAGNTTATAMLNVTAAPSDNYTYFTTVTVETVDSNEEDLVNSSGSPALRTHNQTIIR
IPGPTPSWSLVPTTASSLSWSASSTRGAFTVPVTMDPTYSSLEDVMKTTKIIIGCFVAIT
FMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGASAGVRGSGISGGSTMTQGSG
GGSGTCGGGGGGGGGGSCGGGSGLGIGGSQSLRLHHPEIVNLPNLARAEHLNHYYKAHHF
NNNMLGLGSMGTGVGLNNNNNPSPCSQGMATSVPSSGAISCSPMPVSVGSGTGTLGSLPT
PVPLPQLSIHGSLKGLMGKGQNSQIEPLLFKSGSKENVQETQI
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgaccggcctttccagcccctccccccttctcctactggcccag
ctgcttttgtggctcctccccttccgcacggacacagtaggggccgcctccacaaactgt
cccaccccttgccaatgctccaatcaggcgagtcgagtgatctgtaccaggaggaacctg
gctgatgtgccagacagtatatcagtgaacacgcgatacctcaacctgcaggagaactcg
ataaaggtgatcaaatcagagacgttcaagaacctacggcacctggagatcctccagctc
tctaaaaaccagatcagccagatcgaagtgggcgccttcaatggcctccccaacctcaac
acgctggagctgttcgacaacaagctcacccaggtgccgtcggcggccttcgagtacctc
agcaagctccgcgagctctggctccgcaacaaccccatcgagacgctgccggcgtacgtc
tttaaccgggtgccgtcgctgcggcgcctcgatctgggcgagctcaagaagctcgagcac
atctctgaggcggccttcgtgggcctggacaacctgcgctacctaaacctcggcatgtgc
ggcctgaaggacatccccaacctgacgccactcggccggctcgaggagctggagctgtcg
ggcaaccggctggagatcgtgcggcccggctccttccagggcctggtgtcgctgcgcaag
ctgtggctcatgcactcgcagatgtcggtgatcgagcgcaacgccttcgacgacctgaag
aacctggaggagctcaacctgtcgcacaactcgcttcactccctgccgcacgacctgttc
acgccgctgcccaagctggagcgcgtgcacctcaaccacaacccgtgggtgtgcaactgc
gatgtgctatggctcagctggtggctcaaggagacggtgcccagcaacaccacctgctgt
gcccgctgccacgctccgcctggcctgcgggggcgctacattggcgagctggaccagagc
cacttcacgtgctacgcgccggtcatcgtggagccgccgaccgacctgaacgtgacggag
ggcatggcggccgagctcaagtgccgcaccagcacgtccatgacgtcggtcaactggttc
atgcccaacggcacgctcatgacgcacggctcgtaccgagtgcgtatctcggtgctccac
gacggcacgctcaacttcaccaacgtgacgctgcgcgacacggggccgtacacgtgcgtg
gtgagcaacacagcgggcaacaccaccgccacggccatgcttaacgtaacggccgcgccc
agcgacaactacacctacttcaccaccgtcaccgtggagacagtggacagtaacgaggag
gacctggtcaactcgtcaggctcaccggcgctgcgcacccacaaccagaccatcatccgc
atcccggggcccacgccctcctggagcctggtgcccaccaccgcctcttcgctctcctgg
tcggcgtcgtccacgcgcggcgccttcaccgtgcccgtcactatggaccccacgtactcg
agcttggaagacgtcatgaagaccaccaagatcatcatcggctgcttcgtggccatcacc
ttcatggcggccgtcatgctggtggtcttctacaagctgcgcaagcagcaccagctgcac
aagcaccacggccctgcgcgcgccatcgagatcatcaacgtggaagacgagctgggcgcc
agtgctggtgtgcggggcagcggcatctccggtggctccaccatgacccagggttccggc
ggcggcagtgggacctgcggaggaggaggaggtggaggaggaggcggcagctgcggtggc
ggcagtggtctaggaataggaggaagccagagcctgcggctacatcacccggaaatcgtc
aacctgcccaacctggcgcgtgccgagcacctcaaccactactacaaggcgcaccacttc
aacaacaacatgctgggcctgggcagcatgggcaccggcgtgggccttaacaacaacaac
aacccctcgccctgctcccaggggatggccacgtcggtgcccagctccggcgccatctcc
tgctcaccgatgcccgtgtcggtgggcagcggcacgggcacgctgggctcgctgcccacg
ccggtgcccctgccccagctgagcatccacggctcgctcaagggcctgatggggaaaggg
caaaactctcagatcgagcccctgctcttcaagagtggctccaaggagaatgtgcaagag
actcagatctga
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