Alosa sapidissima (American shad): 121704787
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Entry
121704787 CDS
T11137
Name
(RefSeq) perforin-1-like isoform X1
KO
K07818
perforin 1
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121704787
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Motif
Pfam:
MACPF
C2
Motif
Other DBs
NCBI-GeneID:
121704787
NCBI-ProteinID:
XP_041941192
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Position
3:17740784..17767212
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AA seq
611 aa
AA seq
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MHTLLMSSVFCGSSGDGFLSACHVSFYCLQHTEVTWQLLRGLTMSLSAITFLAAVYLALI
PQTTQSCTRGSPRECKEAEFAPGSNLAGEGFDITKMQRKGAFVIDMNLWRRENNTCMLCR
NPYQEGKMQKVPAAVVDWRPNQKCSMKVASSLYQSSESLVSSSASSVENNWKVGLNLGSA
SLMLAGTNSKLSEYSMEKTKRDKFTFSQQKMSCSYYSYRVSNQPRLHPEFQSAINQLSKK
YTRKTKHAFYKLINNFGTHFIPKVTLGGMVQSVTSIRQCMASLQGLSSDEIKMCLDVEAE
ASIAGRGTARAETKHCQEAKDKIESKNSFSSSFSDRFTEVFGGHTTEPDLLFSADKDPAA
YKEWLSSLPLNPDMISYSLAPLHELLSPNLPVRKELRKAIKHYILESGLWQNCSEPCKSG
VKRNPKESCVCSCHGDPGVGSDCCPVKRGLARVIITAVRASGLWGDTTSATDAYVKVFNS
QNMQLARTHVIWNNNSPQWNMAFDIGDVILSQTSMVKFEVWDEDSKWDDDLLGTCTVNLK
EGTKEDVCRLNHGMFYYKLQVVCGPSLSGKSCSEYVSSPMNGHLERLYVSRHARPVPKDM
LKKMGVFGDEH
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcatacacttttgatgtcttctgttttttgtggttcctcaggtgatgggtttctttcc
gcttgtcacgtaagcttttactgccttcagcacactgaagtcacttggcaactcctgcga
ggtttgaccatgagtttgtcagccattacctttctggcagctgtctacctggccctcata
ccccaaactacccagtcatgcaccagaggctcccctcgcgagtgcaaagaggccgagttt
gctccaggatccaacctggccggtgaaggcttcgacatcaccaagatgcagcgcaaggga
gcctttgtcatcgacatgaacctatggagacgtgaaaacaacacctgcatgctgtgcagg
aacccgtatcaagagggcaagatgcagaaagtcccagcagctgtggtggactggagaccc
aatcagaaatgcagcatgaaggtggccagctcactgtaccagtccagtgagtccctggtc
agttccagtgcgtccagtgtggagaacaactggaaagttggtttgaatttaggatctgca
tctctgatgcttgctggcactaactccaagttgtctgagtactcaatggagaagacaaaa
agggacaaattcacattttcccaacagaagatgtcatgtagctactacagctaccgagtc
tccaaccaaccccgactacaccccgagtttcagtctgccattaatcaactttcaaagaaa
tacaccaggaagaccaagcacgctttctacaaacttatcaataactttggcacccatttc
atacctaaagtgactctgggcgggatggtacagtcggtgaccagcattaggcagtgcatg
gcctctttacagggcctgagctcagacgagatcaagatgtgtctcgacgtggaggctgaa
gccagtattgcaggaagaggcacagcaagggctgagacgaagcactgtcaggaggcgaag
gacaagatagagagcaagaacagcttctccagcagcttcagtgacaggttcacagaggtc
tttggtggtcacaccactgaacctgaccttctcttctctgcagacaaagacccggccgcc
tacaaggagtggctctcctccctgccactcaaccccgacatgatctcctattcactggct
ccccttcacgagttgctgtcccctaaccttccagtgagaaaagaactacgcaaagcaatt
aagcattacattttagagagtggactctggcagaactgctctgagccctgcaagtctggt
gtcaaaagaaacccaaaggagtcctgtgtttgcagttgccatggtgatcctggtgtaggt
agtgactgttgtcctgttaaacgcggtctcgcacgggtcattatcactgcagtgagggcc
tctgggttgtggggcgacaccacctcagctacagatgcttacgtgaaggtcttcaactct
cagaacatgcaactggcacgaacccatgtgatttggaacaacaactcacctcagtggaac
atggcctttgatatcggtgatgtcattctctctcagaccagcatggtgaagttcgaggtc
tgggacgaggacagcaagtgggatgacgacctgctcggaacttgcacagtgaacctcaag
gaaggaacaaaggaggatgtgtgtcgcctgaaccacggaatgttctactacaaactccag
gtggtctgtggtccaagtctgagtggcaagtcctgctctgagtacgtgagctctcccatg
aacggtcacctggagaggctgtatgtgtctcgtcatgcccgacccgtaccaaaggacatg
cttaagaaaatgggagtctttggggatgaacattag
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