Alosa sapidissima (American shad): 121704936
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Entry
121704936 CDS
T11137
Symbol
cldni
Name
(RefSeq) claudin i
KO
K06087
claudin
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03272
Virion - Hepatitis viruses
asad04382
Cornified envelope formation
asad04514
Cell adhesion molecule (CAM) interaction
asad04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
121704936 (cldni)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121704936 (cldni)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121704936 (cldni)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121704936 (cldni)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
asad03037
]
121704936 (cldni)
04147 Exosome [BR:
asad04147
]
121704936 (cldni)
Cilium and associated proteins [BR:
asad03037
]
Other cilia and associated proteins
Stereociliary proteins
121704936 (cldni)
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
121704936 (cldni)
Exosomal proteins of colorectal cancer cells
121704936 (cldni)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Trp_oprn_chp
DUF8070
Motif
Other DBs
NCBI-GeneID:
121704936
NCBI-ProteinID:
XP_041941438
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All DBs
Position
3:17615566..17619211
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AA seq
213 aa
AA seq
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MGSSGVQIVCVALSILGLIGGIVTCIVPKWKVSSFVGSNIVTAQSTNEGIWMTCVSQSTG
QQQCKQYDSMLILSGDLQAARAMTIIGGLILFLALLILLAGSDFTTCVQNTDAKPKMCLV
AGIMILVSGFLLIIPVSWSAHNTITEFNNPLVMAQQKRELGACIFVGWAGSVLLLLAGGL
LCCFSRPSGGSSSGGTAKYRSNGASGVSAPNYV
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgggttcctctggtgtacagattgtgtgtgtggccttgagtatcctgggcctcattggt
gggattgttacctgcattgtaccgaaatggaaggtgtcatcctttgtgggaagcaacatt
gtgactgcccagtctacgaatgagggcatctggatgacatgtgtgtcgcagagcacaggc
cagcagcagtgcaagcagtatgactccatgctcatcctgagcggcgacctgcaggctgca
cgcgccatgaccatcatcggcggcctgatcctcttcctggccctgctcatcctcttggcc
ggctccgactttaccacctgtgtacagaacacagacgctaagcctaagatgtgcctggta
gcggggatcatgattttggtcagcggcttcctcctgatcatccctgtcagctggtcggcc
cacaacaccatcaccgagttcaacaatcccttggtcatggcgcagcagaagagggagctg
ggtgcctgcatctttgtgggatgggccggaagcgttctgctgctgctggccgggggcctc
ctctgctgcttcagccgcccgtccggaggctccagctctgggggcaccgccaagtaccgc
agtaatggtgcctctggtgtctctgcacccaactatgtctag
DBGET
integrated database retrieval system