Alosa sapidissima (American shad): 121704946
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Entry
121704946 CDS
T11137
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85
KO
K14304
nuclear pore complex protein Nup85
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121704946 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asad03019
]
121704946 (nup85)
03036 Chromosome and associated proteins [BR:
asad03036
]
121704946 (nup85)
Messenger RNA biogenesis [BR:
asad03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121704946 (nup85)
Chromosome and associated proteins [BR:
asad03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121704946 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
121704946
NCBI-ProteinID:
XP_041941452
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Position
3:24450224..24457344
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AA seq
653 aa
AA seq
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MEEVDVEPTITFIPGINSKEKHIGFVWGPGDILVYETSHKAAGKQSVGPSCPDVQVVRKD
EDIYSPILRKLFNESHHIFVGLQNIRDDLPSKNKKPQFVSISKNYRSVIRACMEELQQIA
VSTRDPALAAQYGNQVSILLAVELIWNLCEVLFIDAAPAGSLLLHLLDWVRLHKAEVDEK
AQDVLRCESPTRHQFFWDVVISFVLQGRMEEARSMLAKQAVLQPAAQTTFKRMDSLLQKM
PIYNPSSTQTLTEFEVKWRQWHEECDASLQDNSFASNPHLETICKILLGDDDTLLEHKEL
LSTWYHYVVTRLLYTHPTVKPIDLHYYAQMCMDRFLDSQSPPEPLDSILLAAFEFDIHQV
IKDCSIALNNWWFVAHLTDLLHHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQLA
VDYFDHCQGFGRVYLELLIERVPLDTERKALKVLRICENRQMNEQVRSICKIMAKRALRN
NRLGSALSWTIRAKDAAFATLISERFLQDYCSRGTFSDLDLIDNLGPAMLLSDRLTFLGK
YREFHRLYGEKRFTEAAKLLLSLMTAKIAPQSFWMTLLIDALPLLEQKEVIFSVDQTHEL
MFCLEELTSGKAPPNPDRPMQEEDLETTKIELLRLALARNLAMAIVKEGTVEA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtagatgtagagccaacaattacttttatcccaggaataaactcaaaagaa
aaacacattggcttcgtatggggacccggagacatcctagtttatgagacaagtcacaaa
gccgcaggtaaacaatcagtgggaccaagctgtccagacgtgcaggtagtgaggaaagat
gaagacatatattctccaattttgcgcaagctcttcaatgagtcccatcacatctttgtt
ggacttcagaatatcagagatgatttgccaagcaaaaacaaaaagccacaatttgtcagt
atcagcaaaaactacaggtctgttataagagcgtgcatggaagagctccaacaaattgca
gtgtcaactcgagatcctgcactagcagcacagtatggcaaccaggtgtctattcttctg
gctgtggagctcatctggaacctctgtgaggtgctcttcattgatgctgctccagctggc
tccttgctacttcatctgttggactgggtacggctccacaaagcagaggtggatgagaag
gctcaggacgtcctgcgttgtgagagtcccacacgccaccagtttttctgggatgtggtg
atcagttttgtgctgcaggggaggatggaggaggctcggtctatgctagctaaacaggct
gtgctgcagcctgctgcgcagaccacattcaagcgcatggacagcctacttcagaagatg
ccaatttacaatcctagcagcacacagacgctgaccgagtttgaggtgaagtggagacaa
tggcatgaggagtgtgacgccagccttcaggacaactccttcgccagcaacccacacctg
gagaccatctgtaagatcctgctgggtgacgatgacacgcttctggagcacaaggagctg
ctgagcacctggtatcactatgtggtgaccagactactctatactcaccccacagtcaag
cccatcgacctacactactacgcacagatgtgcatggacaggttcctggactcccaaagt
ccccctgagcccttggacagcattcttctcgcagcttttgaatttgacattcaccaagtc
ataaaagactgcagcattgctctcaacaactggtggtttgtggcccacttaactgatctg
ttgcatcactgcaagctgctgcagtcccataatcttcactttggctcaaacctgcgggag
ttcctgcttctggagtacgcctcgggtctgttcacacatcacagtctgtggcagttggca
gtggactactttgaccactgccagggtttcgggcgggtgtacctggagctgctgatcgag
cgcgtgcccctggacacggagcggaaggccctgaaggtgctgcgcatctgtgagaacagg
cagatgaacgaacaggtgcgcagcatctgtaagatcatggccaagcgggcgctccggaac
aaccggctgggctctgccctctcctggaccatccgggccaaagatgctgctttcgccacg
ctcatttcagaaaggttccttcaggactattgctcccgcggaaccttctctgacctggac
ctgattgacaacctggggccagccatgctactgagcgacagactcaccttccttggtaaa
taccgggagttccacaggctgtatggagagaagcgcttcacagaggctgccaagctcctg
ctgtccctcatgactgctaagattgcccctcagagcttctggatgaccctgcttatcgac
gcactgccactgcttgaacagaaagaggtgatcttctcagtggatcaaacacatgagctg
atgttctgcttggaggagctgacctctggaaaggccccacccaaccctgaccgacccatg
caggaggaagaccttgagaccacaaagatcgagctcctcagactggcgttggctcggaac
ctcgccatggcgattgtgaaggagggcaccgtagaagcttga
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