Alosa sapidissima (American shad): 121704978
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Entry
121704978 CDS
T11137
Symbol
srsf2a
Name
(RefSeq) serine and arginine rich splicing factor 2a isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
asad Alosa sapidissima (American shad)
Pathway
asad03040
Spliceosome
asad05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121704978 (srsf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121704978 (srsf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asad03041
]
121704978 (srsf2a)
Spliceosome [BR:
asad03041
]
Common components
Common spliceosomal components
SR proteins
121704978 (srsf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RBD_AKAP-17A
RSRP
Nup35_RRM_2
RRM_PARP14_3
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
121704978
NCBI-ProteinID:
XP_041941538
LinkDB
All DBs
Position
3:35382152..35385786
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AA seq
236 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFMDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHYGRRGGPPSRRYGGSGGGGGG
GGGGGGGGGGGYGRRSRSYSPRRRRRSRSRSRSRSRSRSRSRYSRSRSRSYSRSRSRSKT
RTPRRSKSKSASRSRSRSKSKSRSRSRTPPSNKGSKSRSRSRSRPKSPEDNETAPS
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggtcggccgccgcccgacgtggagggcatgacctcgctcaaagttgacaat
ttgacataccgcacgtctccagaaacgttgaggcgcgttttcgaaaagtacgggcgagtg
ggagacgtgtatattcctcgtgatagatacacgaaagaaagccgcggttttgccttcgtg
cggtttatggacaagcgtgatgctgaggacgcaatggacgctatggatggagctttgctc
gatgggcgcgaattgagagtgcaaatggcacgttacgggcgcccaccagattcccattat
gggcgacgaggaggccccccgtctcgaagatatggcggcagcggcggtggaggaggaggt
ggtggtggcggcggcggcggcggtggtggaggttatggacgcagaagccgaagctacagt
ccacgccgccgtagacgcagccgttccaggagcaggagccggtcccgctctcgtagccgg
tcccgctacagccgctcaaggtccaggtcctactcacggtcccggtcccgctccaagacc
cgtacaccgcgtaggagtaagtccaaatcggcatccagatcccgctctcggtcaaagtcc
aagtcccgttccagaagccgcactccaccctccaacaaaggctccaagtcgaggtcaaga
tcaagaagccgacccaagtctcccgaagacaacgaaacggctccgtcctga
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