Alosa sapidissima (American shad): 121705050
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Entry
121705050 CDS
T11137
Symbol
rhot1a
Name
(RefSeq) mitochondrial Rho GTPase 1-A isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121705050 (rhot1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
asad03029
]
121705050 (rhot1a)
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
asad04031
]
121705050 (rhot1a)
Mitochondrial biogenesis [BR:
asad03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
121705050 (rhot1a)
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
121705050 (rhot1a)
GTP-binding proteins [BR:
asad04031
]
Small (monomeric) G-proteins
Rho Family
Miro
121705050 (rhot1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
EF-hand_6
Arf
EF-hand_7
EF-hand_1
MMR_HSR1
AAA
EF-hand_8
RsgA_GTPase
AAA_22
AAA_25
Motif
Other DBs
NCBI-GeneID:
121705050
NCBI-ProteinID:
XP_041941691
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All DBs
Position
3:complement(26269867..26289057)
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AA seq
706 aa
AA seq
DB search
MRKDVRILLVGEPKVGKTSLIMSLVSEEFPDEVPLRAEEITIPADVTPERVPTHIVDYSE
AEQSDEQLYQEISKANVICIVYSVNNKKSIEKVTSHWIPLINDRTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYSEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
MKPSCIKSLTRIFKVSDLDNDGVLNDNELNFFQRTCFNIPLAAQALEDVKNVVRKNITDG
VKDNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYDDDLELTQEYLFPLLKIPSDCTTE
LNHNAYLFLQGVFDKHDKDRDCALSPDELKDLFKVFPYMPWGPDVNNTVCTNEQGWITYQ
GYLSQWTLTTYLDVQRCLEYLGYLGYSIINEQESQAAAITVTRNKRIDLQKKQTQRSVFR
CNVLGAHNSGKSGFLQAFLERNLVRQRKIKDDHKSYYAMNTTYVYGQEKYLLLHEVSPDL
DFLSDTDLACDVVCLIYDVSNPRSFEYCAKAYKRYFMDSKTPCMIIAAKSDLHEVRQQST
LPPLDFCRKHRLHPPQPFTCNSTDAPSKDIYTKLTTMAMYPHAKLRCMCACNRCTFCVSH
NLMNSELVRSIKATLYTALLNRLRPYVEHLGACLLTDEDSSLIHQVHEVTYVEESIYMES
SVDPFMPRHMTQADLKNSTFWLRASLGATVFAVLGFAMYKAILKQR
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaggacgtcaggatattgctggttggtgaacccaaagtggggaagacatcactg
atcatgtcattggtcagtgaggagttccccgacgaggttcccctgcgtgccgaagagatt
accattccagcagatgtcacaccagaaagagtgcccacacacatagtggactattcagag
gctgagcagtcagatgaacagttataccaagaaatttccaaggctaatgtaatatgcatc
gtctattctgtcaacaacaagaagtctattgagaaggtgacaagccactggattcctctc
atcaacgacagaacggacaaagacagcagggtgccgctgatcctggtggggaacaagtcg
gacctggtggagcacagcagcatggagaccatcctgcccatcatgaaccaatactctgag
atcgagacctgcgtggagtgttcagccaagaacctgaagaacatttccgagttgttctac
tatgcccagaaggctgtactgcaccctacaggaccactctactgtcctgaggagaaggag
atgaagccgtcgtgcatcaaatccctcacgcgcattttcaaagtgtccgacctcgacaac
gatggagttctgaacgacaacgagctcaacttcttccagaggacgtgtttcaacatccca
ctggctgctcaggctttggaggacgtcaagaacgtggtaaggaagaacatcacggacgga
gtgaaggacaacggcctcacactcaaaggtttcctgttcctgcacacactcttcatccag
aggggccggcacgagaccacctggactgtcctgcggcgtttcggctacgacgacgacctg
gagcttacacaggagtacctgtttccactgctgaagatcccatcagactgcaccacagag
ctgaaccacaatgcgtatctcttcctgcagggtgtctttgacaagcatgacaaagaccga
gactgtgctctgtcccctgatgagctgaaggacctattcaaagtcttcccctacatgccc
tggggccctgacgtcaacaacactgtctgcaccaacgagcagggctggatcacctaccag
ggatacctatcacagtggacgctaacgacgtacctggatgtgcagaggtgtctagagtac
ctgggctaccttggctattccatcattaacgaacaagagtctcaagcagctgctatcaca
gtgacgcggaacaagcgtattgacctgcagaagaagcagacgcagcgcagcgtgttccgc
tgtaacgtgctgggagcacacaacagtggcaagagcggctttctgcaggctttccttgag
aggaacctcgtgcgacagcggaagataaaagatgatcacaagtcctactacgccatgaac
accacctacgtctacggccaggagaagtacctgctgcttcatgaggtgtctccagacctg
gacttcctgtcggacacagatttggcctgtgatgtggtctgtctgatctatgatgtcagc
aacccacgttcctttgagtactgcgccaaggcctacaagcgctacttcatggacagtaag
acgccgtgcatgatcattgccgccaagtcggacctgcacgaggtgcggcagcagagcacc
ctccccccactggacttctgccgcaagcaccggctgcacccgccacagccattcacctgc
aacagcaccgacgcaccaagcaaagacatctacaccaaactcaccaccatggccatgtac
ccccacgccaagttgcggtgcatgtgcgcctgcaaccggtgcaccttttgcgtctcgcac
aacctgatgaactctgagctggtgcgctctatcaaggccaccctctacacggcccttctc
aacaggttgcggccctatgtcgagcacctgggcgcatgcctcttgactgatgaggactcc
agcctcatccaccaggtgcacgaggtcacctatgtagaggagtccatctacatggagtcg
tctgtcgatccctttatgcccagacacatgacccaggctgacctgaagaactccaccttc
tggctgcgggcgagtttgggtgccaccgtctttgccgtgctgggctttgccatgtacaag
gccatcctcaagcagcggtga
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