Alosa sapidissima (American shad): 121705063
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Entry
121705063 CDS
T11137
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121705063
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asad04812
]
121705063
04147 Exosome [BR:
asad04147
]
121705063
Cytoskeleton proteins [BR:
asad04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
121705063
Exosome [BR:
asad04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121705063
Exosomal proteins of other body fluids (saliva and urine)
121705063
Exosomal proteins of colorectal cancer cells
121705063
Exosomal proteins of melanoma cells
121705063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
ATG16
Aspzincin_M35
PUMA_CC
CENP-F_leu_zip
Bacillus_HBL
CREPT
TBCA_PH
ATG17_like
Motif
Other DBs
NCBI-GeneID:
121705063
NCBI-ProteinID:
XP_041941718
LinkDB
All DBs
Position
3:36037973..36042764
Genome browser
AA seq
460 aa
AA seq
DB search
MASTYSRVSMSSSGSMRGGSSMGGGLSMGGGMSMGSSGLSLSGGSARMSVMRAGSVYGGA
GGAGVRISGASRTLSMGGGGGGGYGFSSGGGYGGGYSMSSSMEGGVIGNEKFTMQNLNDR
LASYLVKVRTLEKANAELELKIRQYMESKTGPAAHDFKGHFGVINDLRGKIQAALLLKGS
VHLNIDNATLAVDDFRVKYEAELNMRQSVEADIGGLRRVLDDLTLSKSDLNMQISGLQDE
LAYMQKTHQEDLLTIRGQVSGQVHVEVDAAPQEDLTKIMTEIREHYEAVAVKNRKELETW
FQAKTESLQKEVKTSTEVLQTSRTEISTVKSTYQALQIELQSLLSMKASMEGTLAETKNR
YGGIMAGYQSQVSSLEAQLTQLRADLESQSSEYKMLLDIKTRLELEIAEYKRLMDGEAVS
SSSSSSSSRTKYITVVEEVVDGRVMSSSSSSTSSSAIRRY
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggccagcacttacagccgtgtctccatgtcctcatctggctccatgcgtggggggtcc
tccatgggcggagggctctccatgggcggagggatgtccatgggctcttccggactctcc
ctgtctggaggtagtgcccgcatgagcgtcatgagggccgggagcgtgtacggaggggca
ggtggcgctggcgtgcgcatctctggcgcctcccggaccctctccatgggcggcggtggc
ggcggtggctacggcttctcctccggcggagggtacggaggaggctacagcatgtccagc
agcatggaaggaggcgtcatcggcaacgagaagttcaccatgcagaacctcaacgaccgc
ctggcctcctacctggtcaaggtgcgcaccctggagaaggccaacgccgagctggagctg
aagatcagacagtacatggagagcaagactggacctgctgcccatgatttcaagggtcac
tttggagtcatcaatgacctcaggggcaagattcaggcagctcttctgcttaagggcagt
gtgcacctcaacatcgacaacgcaactctggcagtggatgacttcagggtcaagtatgaa
gctgagctgaacatgcgtcagtctgtggaggcagacatcggtggactgaggagagtgctg
gatgacctcaccctgtccaaatccgacctgaacatgcaaatctctggcctacaggacgag
ctggcatacatgcaaaagacccaccaggaggacctgctgaccatacgcggtcaggtgagc
ggacaggtgcatgtggaggtggacgcggcacctcaggaggacctgactaagatcatgaca
gaaatccgcgaacactacgaagcggttgccgtcaagaacaggaaagagcttgagacgtgg
ttccaggccaagacagaatctctacagaaagaggtgaagacaagcacagaagtcctgcag
acatccagaacagaaatcagcactgtcaaaagcacataccaggcgctgcagattgagctg
cagtccctactgagcatgaaagcgtccatggaaggcacgctggcggagactaagaaccgc
tacggtggcatcatggctgggtaccagtctcaggtgagcagcctggaggcccagctcacc
cagctgcgtgcagacctggagagccagagctccgagtacaagatgctcctggacatcaag
accaggctggagctggagatcgcagagtacaagaggctgatggacggagaagcagtcagc
tcgtcatcctccagctccagttccaggaccaaatatatcacagtggtggaggaagtggtg
gacggacgggtaatgtcctcgtccagcagttcgacctcgtcctccgcaatccgcaggtac
taa
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