Alosa sapidissima (American shad): 121705071
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Entry
121705071 CDS
T11137
Symbol
npnta
Name
(RefSeq) nephronectin a isoform X1
KO
K06824
nephronectin
Organism
asad Alosa sapidissima (American shad)
Pathway
asad04512
ECM-receptor interaction
asad04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121705071 (npnta)
04518 Integrin signaling
121705071 (npnta)
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Motif
Pfam:
MAM
cEGF
EGF_CA
EGF_DL_JAG
JAG1-like_EGF2
EGF_PEAR1L
FXa_inhibition
EGF
Motif
Other DBs
NCBI-GeneID:
121705071
NCBI-ProteinID:
XP_041941747
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Position
3:30774171..30817809
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AA seq
527 aa
AA seq
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MDVQAMERDLLLRAHWYKCMFLYVCLVLANAEFDGRWSTTQIGSSNGLCRYGGRVDCCWG
WKRNSWGHCQPSYVLTLKVVGIRCRDQAVCHHGCKHGQCAGPNKCTCHPGFTGKTCNQDV
HICAMANCQYGCDVVRGEVHCQCPSPGLHLAPDGRTCVDVDECAAGLAVCPKFRKCINSF
GSYICRCYEGLVLQFINGKYQCIAIPKVIIEPPRPGKIPPKNRVPDADQTRITNLQPPVT
IPSIVKTTNSTVSTAVPPPRRKTVPHKPPVPTRQSQRPTVRTPLLVTPKPHFRPWRPPFP
ITKAPSLTHKVNPTQWLPAPTITSLDNRISKVFTPKQRGDVHIPRKQGQENGPGINFDVE
LGNTDEEMGDDPEAGVLSCTFDYGLCGWIRHREGDSQWTIVEYPSGEKYLTLPEVTVKHS
GRGAQLLLPLIAPWNQGSMCLSFRHKLAGHHVGMLQVFVEKGRHHSPAMWGRTRGSGWMS
AQITLWGNKLESIIIKGERRRNRQGEIALDDITLRRGHCPEEYNLRH
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atggacgttcaggcaatggagcgcgatttactattgcgggcgcattggtataaatgtatg
tttctatacgtttgcttggtcttggcaaatgcggagttcgatggcagatggtctactacg
cagattggatcatctaatggactgtgtcggtatggtgggcgagtcgactgctgctggggt
tggaaacgaaattcctggggtcactgccaaccatcctacgtcttaaccctcaaagtagtc
gggataaggtgcagagaccaagctgtatgccaccatggatgcaagcacggacagtgtgct
ggacctaacaagtgcacgtgccaccctggcttcacgggaaagacctgcaaccaagatgtc
cacatttgtgcaatggcaaactgtcagtatggatgtgacgtggtgagaggggaggtgcac
tgtcaatgtccatctcctggattacatcttgccccagatgggaggacatgtgtggatgta
gatgagtgtgcagctggtcttgctgtgtgccccaagtttcgcaaatgcatcaacagcttt
gggagctacatctgcagatgctatgagggcttggtcctgcagttcatcaatggaaaatat
caatgtattgctattccaaaggtgattattgagcctccaaggcctgggaaaataccacca
aaaaatagagtccctgatgctgaccagacaaggatcaccaacttacaaccaccagtgacc
ataccatctatagtcaaaacaaccaactccactgtgtctactgcagtacctccacctcga
aggaaaacagttccccataagccacctgtccccacacgtcagtcccaaagacccactgtg
agaactccattattggtcaccccaaaaccacactttagaccctggaggccaccatttccc
attacaaaggccccatctctcactcataaggtcaatcccacacagtggctccctgctcca
acaatcacttccttggataacagaataagcaaagttttcacaccaaaacagagaggagat
gttcacataccacgtaaacaaggccaggaaaatggaccgggtattaattttgatgttgaa
ctgggaaacactgatgaggaaatgggtgatgatccagaggctggtgttctgagctgtact
tttgactatggcctttgtgggtggataaggcacagggaaggagactcacagtggacaata
gtagaatatccttcaggtgagaaatatctgactctccctgaagtcactgtgaagcacagt
ggaaggggagcgcagcttctcctgcctctcattgcaccatggaaccagggctccatgtgt
ctgtctttccgacataagcttgctggccatcatgtgggcatgttgcaagtgtttgtggag
aagggtcgacatcatagcccagcaatgtggggtagaaccaggggaagtgggtggatgtca
gcccagatcacactgtggggcaacaaacttgaaagtataattattaaaggtgagcgtaga
agaaatcgacaaggagagattgctcttgatgacatcactctaagaagggggcactgccca
gaagagtataacctgaggcattga
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