Alosa sapidissima (American shad): 121705127
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Entry
121705127 CDS
T11137
Symbol
wdr46
Name
(RefSeq) WD repeat-containing protein 46
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
asad03009
]
121705127 (wdr46)
Ribosome biogenesis [BR:
asad03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
121705127 (wdr46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
EIF3I
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_2nd
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
B-prop_COPA_B_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
WD40_like
ZNF380_CC
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
121705127
NCBI-ProteinID:
XP_041941855
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Position
3:complement(10156400..10161688)
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AA seq
600 aa
AA seq
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MAATMEAASTKSHVGKKGKPPKRYWDNPTEDSENSHVNKKNRQDGESDSIQGNITTVSPN
KELVTEKQNKNRQSKTNHISGSKDPFPGEAPIPQERLKKFQRGEKSQVTSGLRSKLKEAI
KRSEAESELAQKQAARFDLLLPEDAGFLEGDEDEDTCTISQDDIADAVDITSGAKYFNLH
LSQFGPYRLDYSKAGRHLILGGKRGHVTCIEWQSKQLVSEINVMETVNDVKWLHNEDMFA
VAQKKWLHIYDSKGVELHCIRKFNDVLSMEFLPYHFLLATASATGFLQYLDVSVGKEVVC
INAKLGRLGVMTQNPQNAIIHMGHPNGIVSLWSPNQKEPLVKMLCHQGGVRSVAVDKTGT
YMVTSGLDKKLKVYDIRAFKPLQSYFLPAGAACLSLSQRGLLAAATGDIVQVYRDVLGTP
VTKPYMAHRVRGGITGLSYCPHEDVLGVGHSDGFTSMIVPGAGEPNFDAMDVNPVGSLKQ
RREWEVKALLEKIQPELICLDPSQLGRVDHASWEQRHEERVKTLGYDPLAQEKFKPRMRK
KGRSSSGAVEKRKKKVAHEDQREVIRKTVEENLGKQKELKKEKATLAAQGQRSALDRFKK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaccatggaggcagcgtcgaccaaatcacacgtgggtaaaaagggaaagccc
ccgaagcgctattgggacaatccaacggaggatagtgaaaatagtcacgttaacaagaag
aatcgacaagatggagaaagtgactcaattcaaggaaacatcacaacggtctctcctaat
aaagaattggtcacagagaagcaaaataagaatcgacaaagcaagacaaaccatatctcc
gggtcaaaagaccctttccccggagaagctccaatcccccaagagcggctgaagaagttt
cagagaggagagaagtcccaagtgacgtccggtttgaggtcaaagttaaaagaggccata
aaacgttccgaggcagaatcagagcttgctcaaaaacaggcagctagatttgacctcttg
ctcccagaggacgcaggtttcctagagggagatgaggatgaggatacctgcaccatctct
caggatgacattgcagatgctgtggacatcacttcaggagccaagtattttaacctgcac
ctatctcagtttggtccataccgacttgactatagcaaagctgggaggcatctcatcttg
ggagggaaacgaggtcatgtgacctgcatagagtggcaatcgaaacagttggtgtcagaa
ataaatgtcatggaaacagtcaatgatgttaagtggctgcataatgaagatatgtttgct
gtggctcagaaaaagtggctgcacatatacgactccaaaggggtggagcttcactgtatt
cgcaagtttaatgacgttctcagtatggagtttctgccataccattttctgctggccacg
gcgagtgcaacagggttcctgcagtatctggacgtgtctgtagggaaggaggtggtatgc
atcaatgccaagttgggtcggctcggcgtgatgacccaaaaccctcagaacgctatcatt
cacatgggccatcccaatggcattgtcagcctctggtctcccaatcagaaggagccactc
gtcaagatgctttgtcaccagggtggggtccgctcagtagccgtggacaagaccgggacg
tacatggtgacgtctggtttggacaagaagctgaaggtgtatgacatcagagctttcaag
cctctgcagtcctacttcctgccagcaggggccgcttgtttgtccctcagtcagcgagga
ctgctggctgctgcaacaggagacattgtgcaggtatacagggatgtgttggggacgccg
gtgaccaagccctacatggcccatcgcgtgaggggaggaatcacaggcttgagctactgc
ccacatgaggatgttctgggagtaggacactccgatggattcactagcatgatcgtacca
ggtgcgggtgagcccaacttcgacgccatggatgtgaacccagtgggcagcttgaagcag
cggcgtgagtgggaggtcaaggctctgctggagaagatccagcccgagctcatctgcctg
gacccatcgcagctgggcagagtggaccatgcctcctgggagcagaggcacgaggagcgg
gtgaagaccctgggttatgacccattggctcaggagaagttcaaacctcgcatgaggaag
aagggccgaagctcaagtggcgccgtggagaagaggaagaagaaggttgctcatgaagat
cagagggaggtgattcggaaaacggtggaggagaatttggggaagcagaaggagctgaag
aaggaaaaggccactctggctgctcaaggacagaggtcagcactggacaggtttaagaag
tga
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