Alosa sapidissima (American shad): 121705198
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Entry
121705198 CDS
T11137
Symbol
samd9l
Name
(RefSeq) sterile alpha motif domain-containing protein 9-like isoform X1
KO
K23949
sterile alpha motif domain-contaning protein 9
Organism
asad Alosa sapidissima (American shad)
Brite
KEGG Orthology (KO) [BR:
asad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
asad04131
]
121705198 (samd9l)
Membrane trafficking [BR:
asad04131
]
Endosome - Lysosome transport
Others
Others
121705198 (samd9l)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
SLFN_AlbA_2
TPR_19
SAM_KIDINS220
Motif
Other DBs
NCBI-GeneID:
121705198
NCBI-ProteinID:
XP_041941975
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Position
3:23491566..23499115
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AA seq
1535 aa
AA seq
DB search
MMAEFDNVPVEKWTEALVSSWLRSIGVKEQYVTKLNEEEVDGRILLELTEDYLKRETRMK
SGPALLIIKKRNELVESLQKAHKVPQNQDSFKSEGDDANNHPDTKDKISKAKETSSNIET
QTLPGLTSKKDCKPRPLCKDGIDFTYVKHNVLKPESGIIDLISPCHEYKSFAVAVTLDRT
RLQAKFAKEVIKFGTGCMNIRSNGTIHFGVMDSRDDAGYVHGEIIGVPVLEKDIYVDALD
HIERSFSSVDREDVRQCIRPPQFIEVIDMNSSEKRYVVEVDIVPAISIVRNRVYSVRLPN
FKEKSNKVEFEKETIYCRVGSKTEPVNDQNEFYQRVRDRDSRREEAEQSCFESSPDFSQD
LGRKLTMLVTSGKKFIEKEKWYILITNKLKKEDLNSIDFLLNMKLFCVFDFDADSKVSGL
CSEYSKHHAANLHFMQNYKIPNTMSISEFESHLHLFEQTSWIFCNGRNDFKGNEPQCDEM
TWIKTKMTLLRECVSVICKQILPKGTFLVIFLLTSPVEKPLLHTFYEFFTDMEGHEDIIC
ISESEDNFQKWQSFAEGSCGVETVNRSSVVGMKMSHVNATLQRIQPVTSRSIKHLPIYVK
GECNLETREEERMYSLEILSVNHCDETNPDFVEDQKEIIERQFYHGGNVSWLNFWLADKK
FVGEVIQRDAYQEISDLINDNLRRNVDLPVSCLNIYHHPGSGGSTVARQVLWNSRKMLRC
AVAKSSYSAAMVSEHAFHLREYEEKDTQKCLPVLLLLEDCDKEYLDDLKNELEVAVNTKK
IPRGTLCFILLSCRRSHNPERMCRESPLENVAVTHKLSDKEKRLFAGKRKTLEQQYQPEF
ILTFVLMSEEFDHQMVADYVQQFVTHLLQGIDHASVVTRLIRYVALLNTYVQNSFLSQSH
CEALLAISIHMDRFRQHTFERSLSEQAKLVFIHLRDDRTYIQSVRIIHPLVAKEILQQLL
DDQLQSQLALDLLHEDVLFENRFGKDDYMKFLRALFMRRSRISKGDEFDSFFSPLIDYVR
ENESPAQAIELLKEAYMRFNKDAFFAQQLARLNYRYDQFEDAKHWAEIAASKMPTNSYIL
DTRGQVYRRWFTAKCKALEKVTRTPENTADAIHTALIALECFQQCEKAAIADVETMNNSG
FFAAVEVGCSLLKLLFSLHIFSNKNYGYSECMKYLITDYIPEAVIKPWEDFHSKLKNLQS
SMREALEWISEDLSYFQTDLSTDDEETTESCEAKINHPKNWLVNKSSVYGKYFCDTSLDT
MKKQCQSNPDSLTPFMKRMLIYRLGGGNITTIFSLLSDLKDKDQVKILEDIISLYPRNPL
KAKLDQMDLSNYIATHIALSCLSPQSPKLATLKDLRKLTQQFPIEKRDCLSSALFLLTLL
YWPEEHDTEDVKDEKYDVVLSAVEFLKRSYWTKMKDIPQRRRRIFTHFFLGNGNGFEKFV
HKTKVEKITKLLSVSEKRMKWFRGEVWKMPEIAKLCKHVAGWTEDGTVYLEGPRGRKFNI
PALNTGSVPYGNENVTFYLGFTFRGPVAYNITAKL
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagaatttgacaacgttcctgttgaaaaatggacagaggctttggtaagctcc
tggctgaggtccatcggcgtaaaagaacaatatgtgaccaaactcaatgaagaggaggta
gatgggcggattcttctggaattgacagaggactatttgaaaagagaaactagaatgaaa
tctggaccagctctgttgatcatcaagaagaggaatgaacttgttgaatctcttcaaaaa
gcacataaagtcccccaaaatcaagacagttttaaaagcgaaggtgatgatgcaaacaat
catccagacaccaaggacaagatttcaaaggccaaggaaacctcttcaaacattgagaca
cagaccttgcctgggttaacctcaaagaaagactgtaagcctagacccttatgcaaagat
ggtattgattttacttatgttaagcacaatgttttaaaacctgaatctggaattatcgat
cttatctctccctgtcatgagtacaagtcatttgctgttgcagtaactttagaccgcaca
agactacaggctaaatttgccaaagaggtcatcaaatttggcactggttgcatgaacata
cgatcaaatggcaccatacatttcggtgtaatggacagtagagatgatgctggctatgtg
catggggagatcattggtgtgcctgtgctagaaaaagacatctatgtcgatgctcttgat
catattgagagatccttttcaagtgttgacagagaggatgtgagacagtgcatacggcca
cctcagtttattgaggtgattgatatgaacagctcagagaagaggtatgtggtggaagtt
gacattgtaccagcaataagcattgtgaggaacagagtgtactcggttcgccttcctaat
tttaaagagaaatccaacaaggttgagtttgagaaggaaaccatctattgcagggtaggc
tcaaaaacagaaccggttaatgatcaaaatgagttttaccaaagggtgcgtgacagggat
tcccgaagagaggaggctgagcagtcatgttttgaaagcagcccagacttcagccaagac
cttggaagaaagctcacaatgcttgtaaccagtggcaagaaattcattgagaaggaaaaa
tggtacattctcatcacaaacaaactcaaaaaggaagatctgaacagcattgactttctg
ttgaatatgaagcttttctgtgtttttgactttgatgcagactccaaggtgtcaggattg
tgcagtgagtactcaaaacaccatgctgcaaacttgcatttcatgcaaaactacaaaatt
cccaacacaatgagcatcagtgaatttgagagtcatcttcacttgtttgaacaaaccagt
tggatattttgcaacggacgcaatgacttcaaaggaaatgaacctcagtgtgatgaaatg
acatggatcaaaaccaaaatgactctcctccgagaatgtgtgtcagtgatttgtaaacag
atattgccaaaaggcaccttcctggtaatattcctgctcacatcccctgttgaaaagcct
ttacttcacactttctatgagttctttactgacatggagggtcacgaagacatcatatgt
atctcggaatcagaagacaacttccaaaagtggcagagctttgcagaggggtcttgtggt
gtggaaaccgtaaaccgctcaagtgttgttggaatgaaaatgagtcatgttaatgcaacc
ctacagcgcatccagcccgtgacctcacgctccataaaacacttgccaatctatgtgaaa
ggagagtgcaaccttgagactcgtgaagaggaaaggatgtattcccttgagatcctaagt
gtcaaccattgtgatgaaactaaccctgactttgttgaagatcagaaagaaataattgaa
aggcagttttatcatggagggaatgttagttggttgaacttttggcttgcagacaaaaag
tttgttggggaggtcattcagagggatgcttatcaagaaatttcagaccttatcaatgac
aacctcagaagaaatgttgacctgcctgtcagttgcctgaatatatatcatcatcctggc
agtggtggtagcacagtggccaggcaagttctttggaacagtcgaaaaatgttacgatgt
gctgtggcgaaatcatcatactctgcagccatggtgtcagagcacgcatttcatcttcga
gaatatgaggaaaaggacacccaaaaatgcctcccagttctcttgcttttggaagactgt
gacaaagaatacctggacgatttaaagaatgaattagaggtagcagtcaacaccaagaaa
ataccacgtggaacactgtgtttcatcttgttgagctgcaggaggtcacacaacccagag
cgaatgtgtagagagtcacccttagagaatgttgcagttactcacaagctctcagataag
gaaaagagactttttgcaggaaaacgaaagacacttgagcaacagtaccagccagagttt
atcttgacctttgttttgatgagtgaagaattcgatcatcagatggttgctgattatgtt
caacagtttgtcactcatttgcttcaggggattgaccatgcgtcagtggtcactcggctt
attcgctatgtggcactgctgaatacctacgtgcagaactctttcctctctcagtctcac
tgtgaagccctgcttgccatctcaatccacatggatagatttcgtcagcatacctttgag
agatcactgagtgagcaggcaaaattggtgttcatacacttgagagatgatagaacgtac
attcagtcagttagaattattcatcccttggttgccaaggaaatactgcaacagctctta
gatgatcagctgcaaagccaactggcattggatctacttcacgaagatgtgctgtttgag
aacaggtttggcaaagatgattacatgaagtttctgcgagccctgttcatgaggcgcagc
agaataagcaaaggtgatgaatttgacagtttcttctccccactcatcgactatgtacga
gagaatgaaagtcctgcgcaggccattgagcttcttaaggaggcatacatgcgtttcaac
aaagatgctttctttgctcagcaactggcccgtctcaattatcgttatgatcaatttgaa
gacgcgaagcactgggcagaaatagcggcttctaaaatgcctaccaactcctacatacta
gacacacgaggtcaggtttacaggagatggttcacagcaaaatgtaaagcacttgaaaaa
gttacaagaacgcctgaaaacacagcagatgccattcatacggctctgatagccttggag
tgctttcaacagtgtgaaaaggcagcaatcgcagatgttgaaaccatgaacaactcaggc
ttttttgctgcagtagaagtgggatgcagcttgttgaaactcctgttttccctacatatc
ttctccaacaagaactatggctattcagagtgcatgaaatacctgatcactgactacatt
cctgaggcagtaataaaaccatgggaagattttcattccaaactgaaaaaccttcaatcc
tcaatgcgtgaagctttggagtggatatcagaagacctgagctactttcagactgatttg
agcactgatgatgaagagaccacagaaagttgtgaggctaaaataaaccaccccaagaac
tggctggtaaataagtcttctgtgtacggaaagtacttctgtgatacgtctcttgacacc
atgaaaaaacagtgtcagtctaacccagatagtttgactccctttatgaaacgtatgctg
atatatcgccttggtgggggaaatatcaccacaatcttctcacttttaagtgacctgaag
gacaaagaccaagtcaagatacttgaagacatcatctcattgtacccaaggaatccactg
aaagcaaagctggatcagatggatctttccaactacatagccactcacattgctctgagt
tgcctctcacctcagtccccaaaactggccactctcaaggatcttcggaagctaacccaa
cagtttcccattgagaaacgagactgcttgtcaagtgctctcttccttcttacattgctt
tactggccagaagagcatgacactgaggatgtgaaggatgaaaaatatgatgtagttctc
tcagcagtggaattcctcaaacgtagttactggacaaaaatgaaggatatcccacagaga
aggaggaggatatttactcattttttcctgggtaacggaaatggctttgagaagtttgtt
cacaaaactaaagtggaaaagatcacaaaactcctgagcgtttcagagaagaggatgaag
tggtttcgtggggaggtgtggaagatgccagaaattgcaaagttgtgcaagcatgtagct
ggctggacagaggatgggactgtgtaccttgaaggtccccgggggaggaagttcaacatc
cctgctctgaacacaggttctgtgccttatgggaatgagaacgtcactttctatttgggt
ttcacctttcgaggcccagtggcctacaacattacagcaaagttgtag
DBGET
integrated database retrieval system
